RNA–Protein interactions for RNA: ENST00000483768.1

ZNF561-216, Transcript of zinc finger protein 561, humanhuman

TSL 1 (best)

Gene ZNF561, Length 579 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF561-216ENST00000483768 USP36Q9P275 1121 aaKnown RBP3.66□□□□□ -1.82
ZNF561-216ENST00000483768 IGSF9Q9P2J2 1179 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 MYO1AQ9UBC5 1043 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 FEM1BQ9UK73 627 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 TMPRSS11EQ9UL52 423 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 SCAF8Q9UPN6 1271 aaKnown RBP3.66□□□□□ -1.82
ZNF561-216ENST00000483768 PCDHB1Q9Y5F3 818 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 OVOS2A0A0G2JMS6 1433 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 OVOS2A0A0J9YW53 1432 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 OVOS2Q6IE36 1432 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 PRAG1Q86YV5 1406 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 ATP7BP35670 1465 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 PAPPAQ13219 1627 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 PPLO60437 1756 aa3.66□□□□□ -1.82
ZNF561-216ENST00000483768 TUBGCP6Q96RT7 1819 aa3.65□□□□□ -1.82
ZNF561-216ENST00000483768 WDR90Q96KV7 1748 aa3.65□□□□□ -1.82
ZNF561-216ENST00000483768 PARP4Q9UKK3 1724 aaKnown RBP3.65□□□□□ -1.82
ZNF561-216ENST00000483768 YTHDC2Q9H6S0 1430 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TRBV23OR9-2A0A075B6M9 112 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 C7orf72A4D263 438 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TRIM64A6NGJ6 449 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 HMX3A6NHT5 357 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TRIM64BA6NI03 449 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MYO1FO00160 1098 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PODXLO00592 558 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PIP5K1BO14986 540 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 DKC1O60832 514 aaKnown RBP eCLIP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CLASP2O75122 1294 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PRPF6O94906 941 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 RTN3O95197 1032 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ARIH2O95376 493 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 NDST3O95803 873 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 APOA4P06727 396 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 FAM200BP0CF97 657 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 HSPA1AP0DMV8 641 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 HSPA1BP0DMV9 641 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CYP2C8P10632 490 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 RARBP10826 455 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MYCLP12524 364 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 GSPT1P15170 499 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 AOAHP28039 575 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CASP6P55212 293 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 NKX6-1P78426 367 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MALLQ13021 153 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TSTQ16762 297 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ADCK5Q3MIX3 580 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TBC1D10BQ4KMP7 808 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 RILPL1Q5EBL4 403 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 FIGNQ5HY92 759 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 RRAGBQ5VZM2 374 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 NUGGCQ68CJ6 796 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 KLHDC10Q6PID8 442 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 UNQ6494/PRO21346Q6UXR6 183 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MIGA2Q7L4E1 593 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 HEATR3Q7Z4Q2 680 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 STK32CQ86UX6 486 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CHD1LQ86WJ1 897 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ZNF761Q86XN6 746 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 GALNT13Q8IUC8 556 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PHYKPLQ8IUZ5 450 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 LYSMD2Q8IV50 215 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CCDC191Q8NCU4 936 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 OR2I1PQ8NGU4 316 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 STT3BQ8TCJ2 826 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 AFG1LQ8WV93 481 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CPA5Q8WXQ8 436 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 HERVK_113Q902F9 699 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 DPF3Q92784 378 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MTFMTQ96DP5 389 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 VMP1Q96GC9 406 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CCDC34Q96HJ3 373 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ZC3H10Q96K80 434 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 COG8Q96MW5 612 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TIGD1Q96MW7 591 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TUBGCP5Q96RT8 1024 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MPHOSPH8Q99549 860 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 TREX2Q9BQ50 279 aaPredicted RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 SLF1Q9BQI6 1058 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ADI1Q9BV57 179 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 AGXT2Q9BYV1 514 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PAIP1Q9H074 479 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CCDC68Q9H2F9 335 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MLXIPQ9HAP2 919 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MARCH2Q9P0N8 246 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 SRP68Q9UHB9 627 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 DSEQ9UL01 958 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 NUB1Q9Y5A7 615 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 CFAP20Q9Y6A4 193 aaKnown RBP3.65□□□□□ -1.83
ZNF561-216ENST00000483768 ATP23Q9Y6H3 246 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 PNPLA7Q6ZV29 1317 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 KIF1BO60333 1816 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 LMO7Q8WWI1 1683 aa3.65□□□□□ -1.83
ZNF561-216ENST00000483768 MAP3K5Q99683 1374 aa3.64□□□□□ -1.83
ZNF561-216ENST00000483768 RGPD3A6NKT7 1758 aaPredicted RBP3.64□□□□□ -1.83
ZNF561-216ENST00000483768 RGPD4Q7Z3J3 1758 aa3.64□□□□□ -1.83
ZNF561-216ENST00000483768 ST20-MTHFSA0A0A6YYL1 179 aa3.64□□□□□ -1.83
ZNF561-216ENST00000483768 UBA6A0AVT1 1052 aaPredicted RBP3.64□□□□□ -1.83
ZNF561-216ENST00000483768 PRAMEF25A6NGN4 478 aa3.64□□□□□ -1.83
ZNF561-216ENST00000483768 ISM1B1AKI9 464 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms