RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 GPR17Q13304 367 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 CCDC142Q17RM4 750 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 ZNF280DQ6N043 979 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 PHLDB3Q6NSJ2 640 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 GJB7Q6PEY0 223 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 LRRTM3Q86VH5 581 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 GPR152Q8TDT2 470 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 KAT5Q92993 513 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 LRRC3Q9BY71 257 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 NAT10Q9H0A0 1025 aaKnown RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 NDST4Q9H3R1 872 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 GDAP2Q9NXN4 497 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 CEP72Q9P209 647 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 AJAP1Q9UKB5 411 aaPredicted RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 L1RE1Q9UN81 338 aa10.28□□□□□ -0.76
HMG20B-210ENST00000483417 MRPS23Q9Y3D9 190 aaKnown RBP10.28□□□□□ -0.76
HMG20B-210ENST00000483417 OR6C75A6NL08 312 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 BECN2A8MW95 431 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 H0Y858 1186 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 PRRG1O14668 218 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 ATP2C2O75185 946 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 ASS1P00966 412 aaKnown RBP10.27□□□□□ -0.77
HMG20B-210ENST00000483417 CALCAP01258 141 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 LRG1P02750 347 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 PDGFRBP09619 1106 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 OR4Q2P0C623 313 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 PRKCSHP14314 528 aaPredicted RBP10.27□□□□□ -0.77
HMG20B-210ENST00000483417 PON1P27169 355 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MXI1P50539 228 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 STARD6P59095 220 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MAN2A1Q16706 1144 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MTSS1LQ765P7 747 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 RRAGAQ7L523 313 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 ARHGEF19Q8IW93 802 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 HS6ST3Q8IZP7 471 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 LRRC52Q8N7C0 313 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 FLCNQ8NFG4 579 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 FAM200AQ8TCP9 573 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 KBTBD7Q8WVZ9 684 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 TCEAL4Q96EI5 215 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MCRS1Q96EZ8 462 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MMS19Q96T76 1030 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 ARID3AQ99856 593 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 DDX23Q9BUQ8 820 aaKnown RBP10.27□□□□□ -0.77
HMG20B-210ENST00000483417 PLA2G2FQ9BZM2 168 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 IRF2BPLQ9H1B7 796 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MFSD1Q9H3U5 465 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 SMYD3Q9H7B4 428 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 SIX2Q9NPC8 291 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 TMLHEQ9NVH6 421 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 GDE1Q9NZC3 331 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 DLGAP2Q9P1A6 1054 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MAGEC2Q9UBF1 373 aaPredicted RBP10.27□□□□□ -0.77
HMG20B-210ENST00000483417 FBXL21Q9UKT6 434 aa10.27□□□□□ -0.77
HMG20B-210ENST00000483417 MUC6Q6W4X9 2439 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 RNF225M0QZC1 329 aaPredicted RBP10.26□□□□□ -0.77
HMG20B-210ENST00000483417 PMM2O15305 246 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ECI2O75521 394 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 CEBPBP17676 345 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 FCARP24071 287 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ACAT1P24752 427 aaKnown RBP10.26□□□□□ -0.77
HMG20B-210ENST00000483417 EEF1GP26641 437 aaKnown RBP10.26□□□□□ -0.77
HMG20B-210ENST00000483417 PIK3CAP42336 1068 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 TWF1Q12792 350 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 DUSP4Q13115 394 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ORC1Q13415 861 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 NR1I3Q14994 352 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ZNF699Q32M78 642 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 TANGO2Q6ICL3 276 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 OVOS1Q6IE37 1185 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 SCARA5Q6ZMJ2 495 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 CCDC105Q8IYK2 499 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 FBXL13Q8NEE6 735 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 OR10T2Q8NGX3 314 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 WHAMMQ8TF30 809 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ING5Q8WYH8 240 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ZNF512Q96ME7 567 aaPredicted RBP10.26□□□□□ -0.77
HMG20B-210ENST00000483417 ZSWIM3Q96MP5 696 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 CORO1BQ9BR76 489 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 INTS2Q9H0H0 1204 aaKnown RBP10.26□□□□□ -0.77
HMG20B-210ENST00000483417 VRTNQ9H8Y1 702 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 CA14Q9ULX7 337 aa10.26□□□□□ -0.77
HMG20B-210ENST00000483417 MTMR11A4FU01 709 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 SHISA7A6NL88 538 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 PROB1E7EW31 1015 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
HMG20B-210ENST00000483417 ZNF197O14709 1029 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 GABRDO14764 452 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 EPHB6O15197 1021 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 STX10O60499 249 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 HUS1O60921 280 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 NOL4O94818 638 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 STAU1O95793 577 aaKnown RBP10.25□□□□□ -0.77
HMG20B-210ENST00000483417 ODC1P11926 461 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 CPB1P15086 417 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 ATICP31939 592 aa10.25□□□□□ -0.77
HMG20B-210ENST00000483417 GNL1P36915 607 aaPredicted RBP10.25□□□□□ -0.77
HMG20B-210ENST00000483417 PNPLA4P41247 253 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms