RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 LRRC15Q8TF66 581 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 OSCP1Q8WVF1 389 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 CALML4Q96GE6 196 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 SLC22A12Q96S37 553 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 FIZ1Q96SL8 496 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 BLOC1S4Q9NUP1 217 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 UXTQ9UBK9 157 aaPredicted RBP13.8□□□□□ -0.2
TMEM54-206ENST00000482771 ZMIZ1Q9ULJ6 1067 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 WNT6Q9Y6F9 365 aa13.8□□□□□ -0.2
TMEM54-206ENST00000482771 NUP210Q8TEM1 1887 aaPredicted RBP13.8□□□□□ -0.2
TMEM54-206ENST00000482771 LAMA1P25391 3075 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 FASNP49327 2511 aaKnown RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 TRAV19A0A0A6YYK7 116 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 LNP1A1A4G5 178 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 TOP3BO95985 862 aaKnown RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 USP17L7P0C7H9 530 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 IFNAR2P48551 515 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 IRX4P78413 519 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 FAM160A1Q05DH4 1040 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 ZNF252P-AS1Q0IIN9 211 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 KARSQ15046 597 aaKnown RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 SV2CQ496J9 727 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 C2orf27AQ580R0 203 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 CRELD2Q6UXH1 353 aaPredicted RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 EFCAB13Q8IY85 973 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 PDCL2Q8N4E4 241 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 ARL14EPQ8N8R7 260 aaPredicted RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 TSTD1Q8NFU3 115 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 ACDQ96AP0 544 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 ACBD6Q9BR61 282 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 IKZF4Q9H2S9 585 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 GTF3C4Q9UKN8 822 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 AGAP1Q9UPQ3 857 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 STYXL1Q9Y6J8 313 aa13.79□□□□□ -0.2
TMEM54-206ENST00000482771 ZNF638Q14966 1978 aaKnown RBP13.79□□□□□ -0.2
TMEM54-206ENST00000482771 PATE3B3GLJ2 98 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 CDX4O14627 284 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-206ENST00000482771 HUS1O60921 280 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 TBCAO75347 108 aaKnown RBP13.78□□□□□ -0.2
TMEM54-206ENST00000482771 NOL4O94818 638 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 CKMP06732 381 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 HDCP19113 662 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ACAT1P24752 427 aaKnown RBP13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ABCD1P33897 745 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ZNF77Q15935 545 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 EML3Q32P44 896 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 UAP1L1Q3KQV9 507 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 TTC30AQ86WT1 665 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 CCDC33Q8N5R6 958 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 KDF1Q8NAX2 398 aaPredicted RBP13.78□□□□□ -0.2
TMEM54-206ENST00000482771 SH3RF2Q8TEC5 729 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 USP33Q8TEY7 942 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 POMGNT1Q8WZA1 660 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ATP2A3Q93084 1043 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 MYRFLQ96LU7 910 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 AK8Q96MA6 479 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 TPSD1Q9BZJ3 242 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 TMEM9BQ9NQ34 198 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 DDX43Q9NXZ2 648 aaKnown RBP13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ANK1P16157 1881 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 CACNA1EQ15878 2313 aa13.78□□□□□ -0.2
TMEM54-206ENST00000482771 ANTXRLA6NF34 631 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 PCNX2A6NKB5 2137 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 K7EQS6 105 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 SLC26A4O43511 780 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 TADA3O75528 432 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 IL18RAPO95256 599 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 CEACAM1P13688 526 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ADSSP30520 456 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 POLR2BP30876 1174 aaKnown RBP13.77□□□□□ -0.21
TMEM54-206ENST00000482771 PNPLA4P41247 253 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 DHPSP49366 369 aaPredicted RBP13.77□□□□□ -0.21
TMEM54-206ENST00000482771 SEC13P55735 322 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 TFAMQ00059 246 aaKnown RBP13.77□□□□□ -0.21
TMEM54-206ENST00000482771 POU5F1Q01860 360 aaKnown RBP13.77□□□□□ -0.21
TMEM54-206ENST00000482771 EML5Q05BV3 1969 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 POSTNQ15063 836 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 PMS2CLQ68D20 193 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 SCARA3Q6AZY7 606 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ANO7Q6IWH7 933 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ZNF720Q7Z2F6 126 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 C11orf74Q86VG3 221 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 SCN4BQ8IWT1 228 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 RASSF8Q8NHQ8 419 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 CCDC26Q8TAB7 109 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 PIGKQ92643 395 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 RAD54LQ92698 747 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 TRMT2BQ96GJ1 504 aaKnown RBP13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ZNF560Q96MR9 790 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 TMEM206Q9H813 350 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ABCB6Q9NP58 842 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 GCNT4Q9P109 453 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 L1RE1Q9UN81 338 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 WASF3Q9UPY6 502 aa13.77□□□□□ -0.21
TMEM54-206ENST00000482771 ASCC3Q8N3C0 2202 aaKnown RBP13.76□□□□□ -0.21
TMEM54-206ENST00000482771 C2orf78A6NCI8 922 aa13.76□□□□□ -0.21
TMEM54-206ENST00000482771 PLCG1P19174 1290 aa13.76□□□□□ -0.21
TMEM54-206ENST00000482771 CSRP1P21291 193 aaKnown RBP13.76□□□□□ -0.21
TMEM54-206ENST00000482771 BCKDHBP21953 392 aa13.76□□□□□ -0.21
TMEM54-206ENST00000482771 DDIT3P35638 169 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms