RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 VIPAS39Q9H9C1 493 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 SLC38A10Q9HBR0 1119 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 NLRC4Q9NPP4 1024 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 PNMA8BQ9ULN7 279 aaPredicted RBP8.3□□□□□ -1.08
SNX13-208ENST00000482558 HYOU1Q9Y4L1 999 aa8.3□□□□□ -1.08
SNX13-208ENST00000482558 MYPNQ86TC9 1320 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 GRID2IPA4D2P6 1211 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 UPK3BL1B0FP48 263 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 UPK3BL2E5RIL1 263 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 H0YCG3 227 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 PMM2O15305 246 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 AOC2O75106 756 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 QARSP47897 775 aaKnown RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 KLK7P49862 253 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 POLR2FP61218 127 aaKnown RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 PSMC6P62333 389 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 TMPRSS15P98073 1019 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 KLHL30Q0D2K2 578 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 ZNF124Q15973 351 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 SHROOM1Q2M3G4 852 aaPredicted RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 KRTAP19-4Q3LI73 84 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 KLHDC7AQ5VTJ3 777 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 RUFY4Q6ZNE9 571 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 GET4Q7L5D6 327 aaPredicted RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 KRT77Q7Z794 578 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 NLRX1Q86UT6 975 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 TBC1D5Q92609 795 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 WDR89Q96FK6 387 aaPredicted RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 PLPPR2Q96GM1 343 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 DYDC2Q96IM9 177 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 C12orf42Q96LP6 360 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 CCDC43Q96MW1 224 aaKnown RBP8.29□□□□□ -1.08
SNX13-208ENST00000482558 TTC1Q99614 292 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 MTFR1LQ9H019 292 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 ACSS3Q9H6R3 686 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 C17orf75Q9HAS0 396 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 MAN1C1Q9NR34 630 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 ANKEF1Q9NU02 776 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 TBC1D7Q9P0N9 293 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 PPP1R9AQ9ULJ8 1098 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 PHTF1Q9UMS5 762 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 SNX12Q9UMY4 172 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 EXOC7Q9UPT5 735 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 UBIAD1Q9Y5Z9 338 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 FHOD1Q9Y613 1164 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 DGKBQ9Y6T7 804 aa8.29□□□□□ -1.08
SNX13-208ENST00000482558 A0A0A6YYK5 440 aaPredicted RBP8.28□□□□□ -1.08
SNX13-208ENST00000482558 NPHP3-ACAD11A0A0J9YXS1 232 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ATP2A1O14983 1001 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 SUSD5O60279 629 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 NOL4O94818 638 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 KRT13P13646 458 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 UCHL3P15374 230 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 STAT1P42224 750 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 CCT5P48643 541 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 NPEPPSP55786 919 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 SNAP25P60880 206 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 CYP4A11Q02928 519 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 SLC9A5Q14940 896 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 NAB2Q15742 525 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 CFAP221Q4G0U5 840 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 FOXB2Q5VYV0 432 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 LRFN4Q6PJG9 635 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 INTS8Q75QN2 995 aaKnown RBP8.28□□□□□ -1.08
SNX13-208ENST00000482558 MIGA2Q7L4E1 593 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 OTUD6AQ7L8S5 288 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 C4orf19Q8IY42 314 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 FAM186BQ8IYM0 893 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 SYCE1Q8N0S2 351 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 MMGT1Q8N4V1 131 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 SMCR8Q8TEV9 937 aaPredicted RBP8.28□□□□□ -1.08
SNX13-208ENST00000482558 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.28□□□□□ -1.08
SNX13-208ENST00000482558 CLIP3Q96DZ5 547 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 EEF2KMTQ96G04 330 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 FAM81BQ96LP2 452 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ACCSQ96QU6 501 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 TM9SF2Q99805 663 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 LXNQ9BS40 222 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 GANQ9H2C0 597 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 UNC45AQ9H3U1 944 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 GSX1Q9H4S2 264 aaPredicted RBP8.28□□□□□ -1.08
SNX13-208ENST00000482558 ANKZF1Q9H8Y5 726 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 AGO4Q9HCK5 861 aaKnown RBP8.28□□□□□ -1.08
SNX13-208ENST00000482558 TCF7L1Q9HCS4 588 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 PICK1Q9NRD5 415 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 KCNH7Q9NS40 1196 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 KLHL11Q9NVR0 708 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 DMAC2Q9NW81 257 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ZNF446Q9NWS9 450 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 RGL1Q9NZL6 768 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ZNF112Q9UJU3 913 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 AP4E1Q9UPM8 1137 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ANKRD6Q9Y2G4 727 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 FER1L6Q2WGJ9 1857 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ASTN1O14525 1302 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 ZNF536O15090 1300 aa8.28□□□□□ -1.08
SNX13-208ENST00000482558 MACROD2A1Z1Q3 448 aa8.27□□□□□ -1.09
SNX13-208ENST00000482558 PRAMEF27A3QJZ7 478 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms