RNA–Protein interactions for RNA: ENST00000482272.5

CTDSP1-208, Transcript of CTD small phosphatase 1, humanhuman

TSL 2

Gene CTDSP1, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-208ENST00000482272 WDR44Q5JSH3 913 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 RESP18Q5W5W9 173 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 C4orf50Q6ZRC1 276 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 HS2ST1Q7LGA3 356 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 TMEM150AQ86TG1 271 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 TTC8Q8TAM2 541 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 SECISBP2LQ93073 1101 aaKnown RBP14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 FUBP3Q96I24 572 aaKnown RBP eCLIP14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 MMS19Q96T76 1030 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 PKMYT1Q99640 499 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 AGPAT3Q9NRZ7 376 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 TDP1Q9NUW8 608 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 CGNQ9P2M7 1197 aaKnown RBP14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 MAGEC2Q9UBF1 373 aaPredicted RBP14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 CACNA1IQ9P0X4 2223 aa14.41□□□□□ -0.1
CTDSP1-208ENST00000482272 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CLIC2O15247 247 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 PRAMEF12O95522 483 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 DLATP10515 647 aaKnown RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CTHP32929 405 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 AFMP43652 599 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SOX9P48436 509 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 FOXK2Q01167 660 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 AMPD2Q01433 879 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CUL4BQ13620 913 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 MAPRE1Q15691 268 aaKnown RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SDHAF4Q5VUM1 108 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 TXNDC8Q6A555 127 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CC2D1AQ6P1N0 951 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 FAM171BQ6P995 826 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 TRAPPC11Q7Z392 1133 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 MON1AQ86VX9 555 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SCN4BQ8IWT1 228 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 NELFCDQ8IXH7 590 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 KIAA2013Q8IYS2 634 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CEP57L1Q8IYX8 460 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SPEM1Q8N4L4 309 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 FSIP1Q8NA03 581 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 XXYLT1Q8NBI6 393 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SCFD1Q8WVM8 642 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 TRMT2BQ96GJ1 504 aaKnown RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 MYRFLQ96LU7 910 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SMG9Q9H0W8 520 aaKnown RBP14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 KIF9Q9HAQ2 790 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 SLC39A2Q9NP94 309 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 GKN1Q9NS71 199 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 NCDNQ9UBB6 729 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 RCOR1Q9UKL0 485 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 CDH9Q9ULB4 789 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 NME7Q9Y5B8 376 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 PTPRDP23468 1912 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 GREB1Q4ZG55 1949 aa14.4□□□□□ -0.1
CTDSP1-208ENST00000482272 NOL4O94818 638 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 CST3P01034 146 aaPredicted RBP14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 FAM163BP0C2L3 166 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 WARSP23381 471 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 LMO2P25791 158 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 CYP2J2P51589 502 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 RUNX3Q13761 415 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 PSMD6Q15008 389 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 PON2Q15165 354 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 KNOP1Q1ED39 458 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 LIMS2Q7Z4I7 341 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 SYNPOQ8N3V7 929 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 DCLK2Q8N568 766 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 GPR161Q8N6U8 529 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 RIN3Q8TB24 985 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 USP13Q92995 863 aaPredicted RBP14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 CCDC127Q96BQ5 260 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 CGRRF1Q99675 332 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 FAM83CQ9BQN1 747 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 SYT15Q9BQS2 421 aa14.39□□□□□ -0.11
CTDSP1-208ENST00000482272 ACTN4O43707 911 aaKnown RBP14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 KLRC4O43908 158 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 TADA3O75528 432 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 PDGFRBP09619 1106 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 GNL1P36915 607 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 GRIK1P39086 918 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 MAGEA11P43364 429 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 TNK2Q07912 1038 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 CYP24A1Q07973 514 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 TRPC3Q13507 836 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 ZNF268Q14587 947 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 TXNDC11Q6PKC3 985 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 VSTM1Q6UX27 236 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 ERMP1Q7Z2K6 904 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 C12orf56Q8IXR9 622 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 PLEKHO2Q8TD55 490 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 KBTBD7Q8WVZ9 684 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 CEP295NLQ96MC4 621 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 EPC1Q9H2F5 836 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 SNX25Q9H3E2 840 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 EHD2Q9NZN4 543 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 SERTAD1Q9UHV2 236 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 RAB23Q9ULC3 237 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 ANAPC1Q9H1A4 1944 aa14.38□□□□□ -0.11
CTDSP1-208ENST00000482272 TRAV19A0A0A6YYK7 116 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 EXOC3O60645 756 aa14.37□□□□□ -0.11
CTDSP1-208ENST00000482272 ATP2C2O75185 946 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms