RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 UNC119BA6NIH7 251 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 C1QTNF3-AMACRE9PGA6 284 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 THAP12O43422 761 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 SPDEFO95238 335 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 ITGALP20701 1170 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 ACVR2AP27037 513 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 IL1R2P27930 398 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 PXNP49023 591 aaPredicted RBP6.89□□□□□ -1.31
SF3B1-210ENST00000482158 DGKEP52429 567 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 MYO1EQ12965 1108 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 STK3Q13188 491 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 TP53BP2Q13625 1128 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 VPS53Q5VIR6 699 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 SDR16C5Q8N3Y7 309 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 PPP1R9BQ96SB3 815 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 CRB3Q9BUF7 120 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 DHX36Q9H2U1 1008 aaKnown RBP6.89□□□□□ -1.31
SF3B1-210ENST00000482158 DKK4Q9UBT3 224 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 HDAC9Q9UKV0 1011 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 SSX2IPQ9Y2D8 614 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 HS3ST4Q9Y661 456 aa6.89□□□□□ -1.31
SF3B1-210ENST00000482158 LOC102723971A0A1B0GUV8 181 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 RAB27BO00194 218 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 CCP110O43303 1012 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 PLA2G6O60733 806 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 PEX11BO96011 259 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 HLA-DOAP06340 250 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 LAG3P18627 525 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 KCNA3P22001 575 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 EEF1GP26641 437 aaKnown RBP6.88□□□□□ -1.31
SF3B1-210ENST00000482158 CHAF1AQ13111 956 aaPredicted RBP6.88□□□□□ -1.31
SF3B1-210ENST00000482158 ARHGEF7Q14155 803 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 SLC29A2Q14542 456 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 SPDYE7PQ495Y7 208 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 RBM20Q5T481 1227 aaKnown RBP6.88□□□□□ -1.31
SF3B1-210ENST00000482158 FNDC7Q5VTL7 733 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 PLAG1Q6DJT9 500 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 ARMC6Q6NXE6 501 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 ERAP2Q6P179 960 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 SPRED1Q7Z699 444 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 GPR149Q86SP6 731 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 YAF2Q8IY57 180 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 MORC4Q8TE76 937 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 POF1BQ8WVV4 589 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 SNX19Q92543 992 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 LENG9Q96B70 501 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 OSBPL9Q96SU4 736 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 PTDSS2Q9BVG9 487 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 CXorf36Q9H7Y0 433 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 ARFGAP3Q9NP61 516 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 NDRG4Q9ULP0 352 aaKnown RBP6.88□□□□□ -1.31
SF3B1-210ENST00000482158 MAN2B2Q9Y2E5 1009 aa6.88□□□□□ -1.31
SF3B1-210ENST00000482158 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.88□□□□□ -1.31
SF3B1-210ENST00000482158 FER1L4A9Z1Z3 1794 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 F5H697 171 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 IFRD1O00458 451 aaPredicted RBP6.87□□□□□ -1.31
SF3B1-210ENST00000482158 RRP9O43818 475 aaKnown RBP6.87□□□□□ -1.31
SF3B1-210ENST00000482158 CSF1RP07333 972 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 GABRB3P28472 473 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 LRPAP1P30533 357 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 CPT1AP50416 773 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 HNRNPMP52272 730 aaKnown RBP eCLIP6.87□□□□□ -1.31
SF3B1-210ENST00000482158 KRTAP10-2P60368 255 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 FOXE3Q13461 319 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 KRT72Q14CN4 511 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 PTCHD3Q3KNS1 767 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 MGAT5BQ3V5L5 792 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 TUBB8Q3ZCM7 444 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 MIIPQ5JXC2 388 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 LAYNQ6UX15 382 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 BEND5Q7L4P6 421 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 ARHGEF19Q8IW93 802 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 TXLNBQ8N3L3 684 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 ENAHQ8N8S7 591 aaPredicted RBP6.87□□□□□ -1.31
SF3B1-210ENST00000482158 BPIFB1Q8TDL5 484 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 SH3RF3Q8TEJ3 882 aaPredicted RBP6.87□□□□□ -1.31
SF3B1-210ENST00000482158 C18orf8Q96DM3 657 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 LRRC46Q96FV0 321 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 PSMD1Q99460 953 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 TTLL2Q9BWV7 592 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 AMBRA1Q9C0C7 1298 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 SLC2A4RGQ9NR83 387 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 CDY1Q9Y6F8 540 aa6.87□□□□□ -1.31
SF3B1-210ENST00000482158 ARID4BQ4LE39 1312 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-210ENST00000482158 A0A087WV62 115 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 A0A0B4J269 797 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 F5H423 210 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-210ENST00000482158 KCNQ3O43525 872 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 FOSP01100 380 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-210ENST00000482158 PTDSS1P48651 473 aaKnown RBP6.86□□□□□ -1.31
SF3B1-210ENST00000482158 MAPK10P53779 464 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 KRT17Q04695 432 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 TUBB3Q13509 450 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 INSCQ1MX18 579 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 ZNF750Q32MQ0 723 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 PREPLQ4J6C6 727 aaPredicted RBP6.86□□□□□ -1.31
SF3B1-210ENST00000482158 TIGD2Q4W5G0 525 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 ARHGAP40Q5TG30 622 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 KRT28Q7Z3Y7 464 aa6.86□□□□□ -1.31
SF3B1-210ENST00000482158 PRRT2Q7Z6L0 340 aaPredicted RBP6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms