RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 PCDHGA2Q9Y5H1 932 aa19.9■□□□□ 0.78
CLK1-211ENST00000481641 TADA3O75528 432 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 PDGFRBP09619 1106 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 TDGF1P13385 188 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 CTHP32929 405 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 MLLT6P55198 1093 aaPredicted RBP19.89■□□□□ 0.77
CLK1-211ENST00000481641 PON2Q15165 354 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 TRAPPC11Q7Z392 1133 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 LIMS2Q7Z4I7 341 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 SPATA2LQ8IUW3 424 aaPredicted RBP19.89■□□□□ 0.77
CLK1-211ENST00000481641 SCN4BQ8IWT1 228 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 CELF5Q8N6W0 485 aaKnown RBP19.89■□□□□ 0.77
CLK1-211ENST00000481641 RIN3Q8TB24 985 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 NELL1Q92832 810 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 USP13Q92995 863 aaPredicted RBP19.89■□□□□ 0.77
CLK1-211ENST00000481641 SYT15Q9BQS2 421 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 MAGEF1Q9HAY2 307 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 KIAA1586Q9HCI6 787 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 ABCB6Q9NP58 842 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 GKN1Q9NS71 199 aa19.89■□□□□ 0.77
CLK1-211ENST00000481641 TNNI1P19237 187 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 PCSK1P29120 753 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 AVPR1AP37288 418 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 RPL10AP62906 217 aaKnown RBP19.88■□□□□ 0.77
CLK1-211ENST00000481641 SATB1Q01826 763 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 CYP24A1Q07973 514 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 TRIM68Q6AZZ1 485 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 FAM171BQ6P995 826 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 Q6ZS52 159 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 XXYLT1Q8NBI6 393 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 SPATA18Q8TC71 538 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 ZNF516Q92618 1163 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 MRPS31Q92665 395 aaKnown RBP19.88■□□□□ 0.77
CLK1-211ENST00000481641 MMS19Q96T76 1030 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 GZF1Q9H116 711 aaPredicted RBP19.88■□□□□ 0.77
CLK1-211ENST00000481641 CRTAC1Q9NQ79 661 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 RCOR1Q9UKL0 485 aa19.88■□□□□ 0.77
CLK1-211ENST00000481641 DMXL1Q9Y485 3027 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 UBE4BO95155 1302 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 DCHS1Q96JQ0 3298 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 LILRB5O75023 590 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 NOL4O94818 638 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 HOXC13P31276 330 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 PSMD6Q15008 389 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 DPH6Q7L8W6 267 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 MON1AQ86VX9 555 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 RALGPS2Q86X27 583 aaPredicted RBP19.87■□□□□ 0.77
CLK1-211ENST00000481641 RUBCNQ92622 972 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 MYLPFQ96A32 169 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 MSANTD3Q96H12 275 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 FNBP1Q96RU3 617 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 CGRRF1Q99675 332 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 MRPL45Q9BRJ2 306 aaKnown RBP19.87■□□□□ 0.77
CLK1-211ENST00000481641 TRPC7Q9HCX4 862 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 C2orf42Q9NWW7 574 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 THG1LQ9NWX6 298 aaKnown RBP19.87■□□□□ 0.77
CLK1-211ENST00000481641 CFAP45Q9UL16 551 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 CDH9Q9ULB4 789 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 NME7Q9Y5B8 376 aa19.87■□□□□ 0.77
CLK1-211ENST00000481641 PVALEFA0A1B0GWK0 134 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 OTOL1A6NHN0 477 aaPredicted RBP19.86■□□□□ 0.77
CLK1-211ENST00000481641 KLRC4O43908 158 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 PDIA4P13667 645 aaKnown RBP19.86■□□□□ 0.77
CLK1-211ENST00000481641 WARSP23381 471 aaKnown RBP19.86■□□□□ 0.77
CLK1-211ENST00000481641 BDNFP23560 247 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 ID4P47928 161 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 CASP4P49662 377 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 PLCB2Q00722 1185 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 BMT2Q1RMZ1 405 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 ITPRIPL2Q3MIP1 535 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 CFAP221Q4G0U5 840 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 ATL3Q6DD88 541 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 MAMSTRQ6ZN01 415 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 HS2ST1Q7LGA3 356 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 CEP57L1Q8IYX8 460 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 TTC16Q8NEE8 873 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 PLEKHO2Q8TD55 490 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 SLC22A12Q96S37 553 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 CYP2S1Q96SQ9 504 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 FAM83CQ9BQN1 747 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 EBF3Q9H4W6 596 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 HPS4Q9NQG7 708 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 TDP1Q9NUW8 608 aa19.86■□□□□ 0.77
CLK1-211ENST00000481641 MAGEC2Q9UBF1 373 aaPredicted RBP19.86■□□□□ 0.77
CLK1-211ENST00000481641 A0A1B0GVL5 298 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 ACTN4O43707 911 aaKnown RBP19.85■□□□□ 0.77
CLK1-211ENST00000481641 ARSAP15289 507 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 DDX6P26196 483 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLK1-211ENST00000481641 CXCL12P48061 93 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 CCR3P51677 355 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 CYP27A1Q02318 531 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 DMWDQ09019 674 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 STK4Q13043 487 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 LRRC32Q14392 662 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 KNOP1Q1ED39 458 aaKnown RBP19.85■□□□□ 0.77
CLK1-211ENST00000481641 ELMO3Q96BJ8 720 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 TRMT2BQ96GJ1 504 aaKnown RBP19.85■□□□□ 0.77
CLK1-211ENST00000481641 PAGE5Q96GU1 130 aa19.85■□□□□ 0.77
CLK1-211ENST00000481641 FUBP3Q96I24 572 aaKnown RBP eCLIP19.85■□□□□ 0.77
CLK1-211ENST00000481641 MYRFLQ96LU7 910 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms