RNA–Protein interactions for RNA: ENST00000481474.5

TRIM27-205, Transcript of tripartite motif containing 27, humanhuman

TSL 1 (best)

Gene TRIM27, Length 7,006 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-205ENST00000481474 HIST3H2AQ7L7L0 130 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 SFR1Q86XK3 245 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 CCDC103Q8IW40 242 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 OR8H2Q8N162 312 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 DTX3LQ8TDB6 740 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 HIST1H2ACQ93077 130 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 OMA1Q96E52 524 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 ADAMTS1Q9UHI8 967 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 RNF112Q9ULX5 631 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 GDI2P50395 445 aaKnown RBP12.03□□□□□ -0.48
TRIM27-205ENST00000481474 MTMR8Q96EF0 704 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 ECSITQ9BQ95 431 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 NCDNQ9UBB6 729 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 JRKLQ9Y4A0 524 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 MED23Q9ULK4 1368 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 SLC11A2P49281 568 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 CCINQ13939 588 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 HIBCHQ6NVY1 386 aaPredicted RBP12.03□□□□□ -0.48
TRIM27-205ENST00000481474 SARM1Q6SZW1 724 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 PRSS58Q8IYP2 241 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 ARL10Q8N8L6 244 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 NAXEQ8NCW5 288 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 NEK6Q9HC98 313 aa12.03□□□□□ -0.48
TRIM27-205ENST00000481474 SMAPO00193 183 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 PRPF3O43395 683 aaKnown RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 AGMOQ6ZNB7 445 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 EFL1Q7Z2Z2 1120 aaKnown RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 ARHGEF25Q86VW2 580 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 BBS4Q96RK4 519 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 C2orf40Q9H1Z8 148 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 CYP4F12Q9HCS2 524 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 GMEB2Q9UKD1 530 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 STX7O15400 261 aaKnown RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 OR10H2O60403 315 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 SRP72O76094 671 aaKnown RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 NUDT17P0C025 328 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 TFPIP10646 304 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 SEMA3AQ14563 771 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 DUOXA2Q1HG44 320 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 PPP1R26Q5T8A7 1209 aaPredicted RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 TMEM179Q6ZVK1 233 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 NECAB2Q7Z6G3 386 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 P3H2Q8IVL5 708 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 NAT16Q8N8M0 369 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 PRMT1Q99873 361 aaKnown RBP12.02□□□□□ -0.48
TRIM27-205ENST00000481474 CHMP2BQ9UQN3 213 aa12.02□□□□□ -0.48
TRIM27-205ENST00000481474 IGF1RP08069 1367 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 CCDC163A0A0D9SF12 145 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 FAM25EA8MYX2 175 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 KRT38O76015 456 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 CNPP09543 421 aaKnown RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 PLD1Q13393 1074 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 GPD1LQ8N335 351 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 WDR41Q9HAD4 459 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 AVENQ9NQS1 362 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 ELOVL2Q9NXB9 296 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 B2RBV5 119 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 POTECB2RU33 542 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 F5H5T6 163 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 HS6ST1O60243 411 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 SLC25A12O75746 678 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 INMTO95050 263 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 GH1P01241 217 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 VAMP7P51809 220 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 GOLGA7BQ2TAP0 167 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 CCDC54Q8NEL0 328 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 INTS7Q9NVH2 962 aaKnown RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 POLR3AO14802 1390 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 DENND4BO75064 1496 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 SOWAHDA6NJG2 315 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 TUBBP07437 444 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 GPRC5AQ8NFJ5 357 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 SIKE1Q9BRV8 207 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 TEX13BQ9BXU2 312 aa12.02□□□□□ -0.49
TRIM27-205ENST00000481474 NHEJ1Q9H9Q4 299 aaPredicted RBP12.02□□□□□ -0.49
TRIM27-205ENST00000481474 LOC102724159A0A0B4J2E5 919 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 MSH3P20585 1137 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 SEC13P55735 322 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 SPARCL1Q14515 664 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 PWP2Q15269 919 aaKnown RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 INSCQ1MX18 579 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 RHOT1Q8IXI2 618 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 ERP27Q96DN0 273 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 MRGBPQ9NV56 204 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 TRMT6Q9UJA5 497 aaKnown RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 XPO1O14980 1071 aaKnown RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 CDC40O60508 579 aaKnown RBP eCLIP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 GSPT2Q8IYD1 628 aaKnown RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 C2orf73Q8N5S3 287 aaPredicted RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 LXNQ9BS40 222 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 PSMD14O00487 310 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 OR6B1O95007 311 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 PLEKHA8P1O95397 391 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 PDX1P52945 283 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 TMC4Q7Z404 712 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 DEFB119Q8N690 84 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 ARRDC4Q8NCT1 418 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 RNFT2Q96EX2 444 aa12.01□□□□□ -0.49
TRIM27-205ENST00000481474 TRNT1Q96Q11 434 aaKnown RBP12.01□□□□□ -0.49
TRIM27-205ENST00000481474 ANTXR1Q9H6X2 564 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms