RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 GLIS1Q8NBF1 620 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 CYP2W1Q8TAV3 490 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 MED15Q96RN5 788 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 ADOQ96SZ5 270 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 HERPUD2Q9BSE4 406 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 TRPM5Q9NZQ8 1165 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 RAD54BQ9Y620 910 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 RAD54L2Q9Y4B4 1467 aa6.21□□□□□ -1.42
UPF3A-207ENST00000481131 ZNF608Q9ULD9 1512 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 LOC102723971A0A1B0GUV8 181 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 FFAR2O15552 330 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 SCAF4O95104 1147 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 CFIP05156 583 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 ATXN1LP0C7T5 689 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 XRCC6P12956 609 aaKnown RBP eCLIP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 ZFP36P26651 326 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 CRHR2Q13324 411 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 TOB2Q14106 344 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 ARHGEF7Q14155 803 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 SLC29A2Q14542 456 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 R3HDM1Q15032 1099 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 ELF2Q15723 593 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 PLAG1Q6DJT9 500 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 ZNF585AQ6P3V2 769 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 USP49Q70CQ1 688 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 KRT28Q7Z3Y7 464 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 CXorf38Q8TB03 319 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 CPT1CQ8TCG5 803 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 NACC2Q96BF6 587 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 MOGAT1Q96PD6 335 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 PPP1R9BQ96SB3 815 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 BDH2Q9BUT1 245 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 DHX36Q9H2U1 1008 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 DNMT3BQ9UBC3 853 aaKnown RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 KCNE5Q9UJ90 142 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 CAPN11Q9UMQ6 739 aa6.2□□□□□ -1.42
UPF3A-207ENST00000481131 MAGED2Q9UNF1 606 aaPredicted RBP6.2□□□□□ -1.42
UPF3A-207ENST00000481131 WRNQ14191 1432 aaPredicted RBP eCLIP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 hCG_1984214I3L0E3 225 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 PODXLO00592 558 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 CCP110O43303 1012 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 KCNQ3O43525 872 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 ACRV1P26436 265 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 PTDSS1P48651 473 aaKnown RBP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 SELENOPP49908 381 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 CPT1AP50416 773 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 ANXA11P50995 505 aaKnown RBP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 LOXL3P58215 753 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 CXADRP78310 365 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 ICA1Q05084 483 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 CCDC38Q502W7 563 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 HS1BP3Q53T59 392 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 RABL3Q5HYI8 236 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 PGBD2Q6P3X8 592 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 TLDC1Q6P9B6 456 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 TMEM108Q6UXF1 575 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 KIAA0408Q6ZU52 694 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 TMEM132CQ8N3T6 1108 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 MYCT1Q8N699 235 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 IPO4Q8TEX9 1081 aaKnown RBP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 ZNF384Q8TF68 577 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 IPCEF1Q8WWN9 437 aaPredicted RBP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 MUL1Q969V5 352 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 NELL2Q99435 816 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 MAGEB5Q9BZ81 275 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 OBP2BQ9NPH6 170 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 RGL1Q9NZL6 768 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 IGSF9Q9P2J2 1179 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 DKK4Q9UBT3 224 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 MRPS17Q9Y2R5 130 aaKnown RBP6.19□□□□□ -1.42
UPF3A-207ENST00000481131 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 PCDHGB3Q9Y5G1 929 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 FPGT-TNNI3KV9GXZ4 949 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 PBRM1Q86U86 1689 aa6.19□□□□□ -1.42
UPF3A-207ENST00000481131 IFT140Q96RY7 1462 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 PRAMEF33A0A0G2JMD5 474 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 A0A1W2PS29 197 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 GOLGA6L3A6NEY3 463 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 E7ENX8 843 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 TOR1BO14657 336 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 HNRNPDLO14979 420 aaKnown RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 NPC1O15118 1278 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 PLSCR1O15162 318 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 RRP9O43818 475 aaKnown RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 PRAMEF10O60809 474 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 NCR1O76036 304 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CSTBP04080 98 aaKnown RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 KCNA3P22001 575 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 COPAP53621 1224 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 TAP2Q03519 686 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 MYO1EQ12965 1108 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 DYRK1AQ13627 763 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 BLMHQ13867 455 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CYP2A13Q16696 494 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 PFKFB4Q16877 469 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 GEN1Q17RS7 908 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 TMEM95Q3KNT9 176 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CD300EQ496F6 205 aaPredicted RBP6.18□□□□□ -1.42
UPF3A-207ENST00000481131 FOXR2Q6PJQ5 311 aa6.18□□□□□ -1.42
UPF3A-207ENST00000481131 CRTC1Q6UUV9 634 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms