RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 ANKRD36BP1Q96IX9 119 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 BACH2Q9BYV9 841 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 TNMDQ9H2S6 317 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 EBF3Q9H4W6 596 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 ABCB6Q9NP58 842 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 TDP1Q9NUW8 608 aa20.21■□□□□ 0.83
ABCF3-214ENST00000480562 ZNF233A6NK53 670 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 GABRDO14764 452 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 ATP2C2O75185 946 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 NOL4O94818 638 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 PAPSS2O95340 614 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-214ENST00000480562 ARSAP15289 507 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 LHX1P48742 406 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 ASIC1P78348 528 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 RUNX3Q13761 415 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 SIM2Q14190 667 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-214ENST00000480562 FOXD4L5Q5VV16 416 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-214ENST00000480562 SCN4BQ8IWT1 228 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 FOXD4L4Q8WXT5 416 aaPredicted RBP20.2■□□□□ 0.82
ABCF3-214ENST00000480562 HPDLQ96IR7 371 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 TRIM9Q9C026 710 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 TRPC7Q9HCX4 862 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 KBTBD4Q9NVX7 518 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 HSPBP1Q9NZL4 362 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 R3HCC1Q9Y3T6 440 aaKnown RBP20.2■□□□□ 0.82
ABCF3-214ENST00000480562 OBSL1O75147 1896 aa20.2■□□□□ 0.82
ABCF3-214ENST00000480562 ZNF638Q14966 1978 aaKnown RBP20.19■□□□□ 0.82
ABCF3-214ENST00000480562 KIAA0391O15091 583 aaKnown RBP20.19■□□□□ 0.82
ABCF3-214ENST00000480562 PPP6R2O75170 966 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 TNNC2P02585 160 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 LMO2P25791 158 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 PCSK1P29120 753 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 PSMC1P62191 440 aaKnown RBP20.19■□□□□ 0.82
ABCF3-214ENST00000480562 SPEM2Q0P670 501 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 MYO1EQ12965 1108 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 LAIR1Q6GTX8 287 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 PKN3Q6P5Z2 889 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 LONP2Q86WA8 852 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 TTC16Q8NEE8 873 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 SPATA18Q8TC71 538 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 CHFRQ96EP1 664 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 ZNF396Q96N95 335 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-214ENST00000480562 SLC22A12Q96S37 553 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 LRRC27Q9C0I9 530 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 KIF9Q9HAQ2 790 aa20.19■□□□□ 0.82
ABCF3-214ENST00000480562 UXTQ9UBK9 157 aaPredicted RBP20.19■□□□□ 0.82
ABCF3-214ENST00000480562 LMNB2Q03252 620 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 SURF1Q15526 300 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 DUOXA2Q1HG44 320 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 FOXD4L6Q3SYB3 417 aaPredicted RBP20.18■□□□□ 0.82
ABCF3-214ENST00000480562 CFAP221Q4G0U5 840 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 FSTL4Q6MZW2 842 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 CC2D1AQ6P1N0 951 aaPredicted RBP20.18■□□□□ 0.82
ABCF3-214ENST00000480562 FAM171BQ6P995 826 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 SHC4Q6S5L8 630 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 FOXD4L3Q6VB84 417 aaPredicted RBP20.18■□□□□ 0.82
ABCF3-214ENST00000480562 SYNPOQ8N3V7 929 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 RDH13Q8NBN7 331 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 TRMT2BQ96GJ1 504 aaKnown RBP20.18■□□□□ 0.82
ABCF3-214ENST00000480562 MYRFLQ96LU7 910 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 CYP2S1Q96SQ9 504 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 SYT15Q9BQS2 421 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 CUEDC2Q9H467 287 aa20.18■□□□□ 0.82
ABCF3-214ENST00000480562 NCOR2Q9Y618 2525 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 SOBPA7XYQ1 873 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 PDGFRBP09619 1106 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 CASP1P29466 404 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 ATXN1P54253 815 aaKnown RBP20.17■□□□□ 0.82
ABCF3-214ENST00000480562 AMPD3Q01432 767 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 TMEM196Q5HYL7 178 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 FAM26FQ5R3K3 315 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 EPM2AIP1Q7L775 607 aaPredicted RBP20.17■□□□□ 0.82
ABCF3-214ENST00000480562 LIMS2Q7Z4I7 341 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 IQUBQ8NA54 791 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 MYLPFQ96A32 169 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 FUBP3Q96I24 572 aaKnown RBP eCLIP20.17■□□□□ 0.82
ABCF3-214ENST00000480562 CRTAC1Q9NQ79 661 aa20.17■□□□□ 0.82
ABCF3-214ENST00000480562 PRR5-ARHGAP8B1AHC4 643 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 CLIC2O15247 247 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 EIF3DO15371 548 aaKnown RBP eCLIP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 TGFB1I1O43294 461 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 CUTAO60888 179 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 RETP07949 1114 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 DLATP10515 647 aaKnown RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 ARHGAP8P85298 464 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 GRSF1Q12849 480 aaKnown RBP eCLIP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 ZNF268Q14587 947 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 MTF1Q14872 753 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 SNRNP35Q16560 246 aaKnown RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 NAIF1Q69YI7 327 aaPredicted RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 DPH6Q7L8W6 267 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 TRAPPC11Q7Z392 1133 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 WDR49Q8IV35 697 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 NELFCDQ8IXH7 590 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 ZNF507Q8TCN5 953 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 MMS19Q96T76 1030 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 FBRSL1Q9HCM7 1045 aaKnown RBP20.16■□□□□ 0.82
ABCF3-214ENST00000480562 AGPAT3Q9NRZ7 376 aa20.16■□□□□ 0.82
ABCF3-214ENST00000480562 MAGEC2Q9UBF1 373 aaPredicted RBP20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms