RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 ERP44Q9BS26 406 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 ZNF518BQ9C0D4 1074 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 RAB17Q9H0T7 212 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 DPH5Q9H2P9 285 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 SMYD3Q9H7B4 428 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 TMEM165Q9HC07 324 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 FAM114A2Q9NRY5 505 aa17.72■□□□□ 0.43
SH3D21-203ENST00000480549 NRCAMQ92823 1304 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 GMNCA6NCL1 334 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TLR3O15455 904 aaKnown RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 EIF4BP23588 611 aaKnown RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 RAD23BP54727 409 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 CACNA2D3Q8IZS8 1091 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 C12orf50Q8NA57 414 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TMEM35BQ8NCS4 154 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 MAGOHBQ96A72 148 aaKnown RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 CDHR5Q9HBB8 845 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 MBLAC1A4D2B0 266 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 FSCN2O14926 492 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 CALB1P05937 261 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 HOXA11P31270 313 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 ATICP31939 592 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 FLT3P36888 993 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TAS2R40P59535 323 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 RPL7AP62424 266 aaKnown RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TMEM132DQ14C87 1099 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TBC1D1Q86TI0 1168 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 AGAP11Q8TF27 550 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 ACAP3Q96P50 834 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 HERPUD2Q9BSE4 406 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 FAM49AQ9H0Q0 323 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 SUDS3Q9H7L9 328 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 NOP53Q9NZM5 478 aaKnown RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 C2CD2Q9Y426 696 aa17.71■□□□□ 0.43
SH3D21-203ENST00000480549 TRIP12Q14669 1992 aaPredicted RBP17.71■□□□□ 0.43
SH3D21-203ENST00000480549 IGHA2P01877 340 aa17.71■□□□□ 0.42
SH3D21-203ENST00000480549 POLR2BP30876 1174 aaKnown RBP17.71■□□□□ 0.42
SH3D21-203ENST00000480549 GRM5P41594 1212 aa17.71■□□□□ 0.42
SH3D21-203ENST00000480549 TWNKQ96RR1 684 aa17.71■□□□□ 0.42
SH3D21-203ENST00000480549 HMGXB4Q9UGU5 601 aa17.71■□□□□ 0.42
SH3D21-203ENST00000480549 PDCD11Q14690 1871 aaKnown RBP17.7■□□□□ 0.42
SH3D21-203ENST00000480549 TMEM191CA6NGB0 347 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 MAN1A1P33908 653 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 ROR2Q01974 943 aaKnown RBP17.7■□□□□ 0.42
SH3D21-203ENST00000480549 ZNF252P-AS1Q0IIN9 211 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 PPP1R15BQ5SWA1 713 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 DENND1BQ6P3S1 775 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 CCDC137Q6PK04 289 aaKnown RBP17.7■□□□□ 0.42
SH3D21-203ENST00000480549 RUFY4Q6ZNE9 571 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 ADPGKQ9BRR6 497 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 CXCL16Q9H2A7 254 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 PSTPIP1O43586 416 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 ADAM17P78536 824 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 LACTBP83111 547 aaPredicted RBP17.7■□□□□ 0.42
SH3D21-203ENST00000480549 ARHGAP22Q7Z5H3 698 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 CCDC63Q8NA47 563 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 SLC4A11Q8NBS3 891 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.7■□□□□ 0.42
SH3D21-203ENST00000480549 TRIM31Q9BZY9 425 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 MTUS1Q9ULD2 1270 aa17.7■□□□□ 0.42
SH3D21-203ENST00000480549 SMIM35A0A1B0GVV1 85 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 HAS3O00219 553 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 CILPO75339 1184 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 PAEPP09466 180 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 BLMHQ13867 455 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 MFSD10Q14728 455 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 PLVAPQ9BX97 442 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 OSBPL1AQ9BXW6 950 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ELOVL4Q9GZR5 314 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 PIDD1Q9HB75 910 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ZDHHC18Q9NUE0 388 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ZFATQ9P243 1243 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 CYTH4Q9UIA0 394 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ZNF232Q9UNY5 417 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 COILP38432 576 aaPredicted RBP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ORC1Q13415 861 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 LLGL1Q15334 1064 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 UAP1Q16222 522 aaPredicted RBP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 DCAF4L1Q3SXM0 396 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 LHX5Q9H2C1 402 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 LRRC19Q9H756 370 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 ITGA11Q9UKX5 1188 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 DNAJC8O75937 253 aaPredicted RBP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 NPTXRO95502 500 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 DRG2P55039 364 aaKnown RBP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 SAPCD2Q86UD0 394 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 NT5DC4Q86YG4 428 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 IFNL1Q8IU54 200 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 HPDLQ96IR7 371 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 GCOM2Q9BZD3 368 aaPredicted RBP17.69■□□□□ 0.42
SH3D21-203ENST00000480549 DPP3Q9NY33 737 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 IP6K2Q9UHH9 426 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 GJD2Q9UKL4 321 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 AGAP1Q9UPQ3 857 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 GINS2Q9Y248 185 aa17.69■□□□□ 0.42
SH3D21-203ENST00000480549 RNF8O76064 485 aa17.68■□□□□ 0.42
SH3D21-203ENST00000480549 STAU1O95793 577 aaKnown RBP17.68■□□□□ 0.42
SH3D21-203ENST00000480549 CYP2C9P11712 490 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms