RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 FAM49BQ9NUQ9 324 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 TMLHEQ9NVH6 421 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 ABI2Q9NYB9 513 aaPredicted RBP11.89□□□□□ -0.51
CLDN11-205ENST00000480067 MAFFQ9ULX9 164 aa11.89□□□□□ -0.51
CLDN11-205ENST00000480067 MYO7AQ13402 2215 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MED7O43513 233 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CCDC130P13994 396 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 FERP16591 822 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CDC25BP30305 580 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 KRT9P35527 623 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 DUSP4Q13115 394 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 DUSP6Q16828 381 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CCDC142Q17RM4 750 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CFAP221Q4G0U5 840 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 LILRA6Q6PI73 481 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ELMSAN1Q6PJG2 1045 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SPPL2BQ8TCT7 592 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ZNF606Q8WXB4 792 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MYLPFQ96A32 169 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 FUBP3Q96I24 572 aaKnown RBP eCLIP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 HNRNPABQ99729 332 aaKnown RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 B3GNT5Q9BYG0 378 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CYP4F11Q9HBI6 524 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ABCB6Q9NP58 842 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ACP6Q9NPH0 428 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 AIPL1Q9NZN9 384 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SLC27A5Q9Y2P5 690 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ATP8B3O60423 1300 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 VWA8A3KMH1 1905 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MTMR11A4FU01 709 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 AKR1B15C9JRZ8 316 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CLDN5O00501 218 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 THAP12O43422 761 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CALCAP01258 141 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CYP11B1P15538 503 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 BDNFP23560 247 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CYP2F1P24903 491 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 BRD2P25440 801 aaKnown RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ADORA2BP29275 332 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 TUFMP49411 452 aaKnown RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 PDE6CP51160 858 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ADKP55263 362 aaKnown RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SLC8A3P57103 927 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 TBX2Q13207 712 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 STILQ15468 1287 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CNGA2Q16280 664 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ASIC2Q16515 512 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MGAT5BQ3V5L5 792 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 PPP1R26Q5T8A7 1209 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 LIN9Q5TKA1 542 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 LLGL2Q6P1M3 1020 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 GPIHBP1Q8IV16 184 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 CNGA4Q8IV77 575 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 FUKQ8N0W3 1084 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MICALL1Q8N3F8 863 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SPC24Q8NBT2 197 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 KREMEN2Q8NCW0 462 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 OR8K1Q8NGG5 319 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SLC22A17Q8WUG5 538 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 MYLIPQ8WY64 445 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 TFAP2BQ92481 460 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SYN2Q92777 582 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 SEPT5Q99719 369 aaPredicted RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 PDCL3Q9H2J4 239 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 PLEKHA4Q9H4M7 779 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 ZNHIT6Q9NWK9 470 aaKnown RBP11.88□□□□□ -0.51
CLDN11-205ENST00000480067 HSFX1Q9UBD0 423 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 HESX1Q9UBX0 185 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 HCFC2Q9Y5Z7 792 aa11.88□□□□□ -0.51
CLDN11-205ENST00000480067 PRUNE2Q8WUY3 3088 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 GOLGA6L6A8MZA4 724 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 O00370 1275 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 NCK2O43639 380 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 FAM200BP0CF97 657 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 FOSL2P15408 326 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 EPCAMP16422 314 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 GTF2F1P35269 517 aaKnown RBP eCLIP11.87□□□□□ -0.51
CLDN11-205ENST00000480067 GRIK1P39086 918 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 ALDH1A3P47895 512 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 HYAL1Q12794 435 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 ARHGAP17Q68EM7 881 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 LCLAT1Q6UWP7 414 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 VSTM1Q6UX27 236 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 CCDC149Q6ZUS6 474 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 PAQR9Q6ZVX9 377 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 IRF2BP2Q7Z5L9 587 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 TCEAL8Q8IYN2 117 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 SMARCD1Q96GM5 515 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 ZNF518BQ9C0D4 1074 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 MTMR10Q9NXD2 777 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 IMPACTQ9P2X3 320 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 TSPAN16Q9UKR8 245 aa11.87□□□□□ -0.51
CLDN11-205ENST00000480067 AP1G2O75843 785 aa11.86□□□□□ -0.51
CLDN11-205ENST00000480067 SEC24AO95486 1093 aa11.86□□□□□ -0.51
CLDN11-205ENST00000480067 SRGAP2BP0DMP2 458 aa11.86□□□□□ -0.51
CLDN11-205ENST00000480067 HAPLN1P10915 354 aaPredicted RBP11.86□□□□□ -0.51
CLDN11-205ENST00000480067 MAGEA11P43364 429 aa11.86□□□□□ -0.51
CLDN11-205ENST00000480067 RPL10AP62906 217 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms