RNA–Protein interactions for RNA: ENST00000480058.5

PRPF4B-205, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 6,775 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-205ENST00000480058 HSPH1Q92598 858 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC35C1Q96A29 364 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF341Q9BYN7 854 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 GABBR1Q9UBS5 961 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 MAD2L2Q9UI95 211 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 XPO7Q9UIA9 1087 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PCDHB8Q9UN66 801 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 OVOS2A0A0J9YW53 1432 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 OVOS2Q6IE36 1432 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TULP2O00295 520 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 OGTO15294 1046 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 GSNP06396 782 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 GEMP55040 296 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NKX1-1Q15270 411 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TFDP3Q5H9I0 405 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 MFSD5Q6N075 450 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 C1orf228Q6PIY5 440 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PRPF39Q86UA1 669 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NT5DC4Q86YG4 428 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ADGRF4Q8IZF3 695 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CAAP1Q9H8G2 361 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LRRC4BQ9NT99 713 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 KIF17Q9P2E2 1029 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 AURKCQ9UQB9 309 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 AAR2Q9Y312 384 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 FLT1P17948 1338 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CFAP74Q9C0B2 1584 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NBPF26B4DH59 902 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PI4K2BG5E9Z4 385 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 C2CD2LO14523 706 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NR3C2P08235 984 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PAX3P23760 479 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 FASP25445 335 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 STAT5BP51692 787 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SESN2P58004 480 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TPI1P60174 286 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PKN2Q16513 984 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CCDC153Q494R4 210 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ERFEQ4G0M1 354 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LUZP2Q86TE4 346 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZDHHC17Q8IUH5 632 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC9A9Q8IVB4 645 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LZTR1Q8N653 840 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NBPF15Q8N660 670 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PCYOX1Q9UHG3 505 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC30A1Q9Y6M5 507 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NPHP4O75161 1426 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ADCY10Q96PN6 1610 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 H3BNX3 289 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 VDRP11473 427 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 RASA1P20936 1047 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ATP6V1C1P21283 382 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 GPD1P21695 349 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NMT1P30419 496 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SEC23AQ15436 765 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 UGT3A1Q6NUS8 523 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SPICE1Q8N0Z3 855 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 C9orf16Q9BUW7 83 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 POLR3FQ9H1D9 316 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 EHD4Q9H223 541 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 LRMDAQ9H2I8 198 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CATSPERBQ9H7T0 1116 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 DBR1Q9UK59 544 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CHMP2BQ9UQN3 213 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SLC4A7Q9Y6M7 1214 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SQORQ9Y6N5 450 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 AFF2P51816 1311 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NEXMIFQ5QGS0 1516 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 E5RI56 91 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PIK3CDO00329 1044 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 FCHO1O14526 889 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TRAFD1O14545 582 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 CNOT3O75175 753 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 USP1O94782 785 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 FBXO21O94952 628 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 GLI1P08151 1106 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 RALAP11233 206 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ALDH18A1P54886 795 aaKnown RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 KCNMA1Q12791 1236 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TOP3AQ13472 1001 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF268Q14587 947 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 RASA2Q15283 850 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 NIPA1Q7RTP0 329 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 RYBPQ8N488 228 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 RAB42Q8N4Z0 105 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 SHCBP1Q8NEM2 672 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 OR2W6PQ8NHA6 318 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 INPP4AQ96PE3 977 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 PAFAH2Q99487 392 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 APOL4Q9BPW4 351 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 COG4Q9H9E3 785 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 JPH1Q9HDC5 661 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 C20orf96Q9NUD7 363 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 MYRFQ9Y2G1 1151 aa6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 ZNF335Q9H4Z2 1342 aaPredicted RBP6.39□□□□□ -1.39
PRPF4B-205ENST00000480058 TET3O43151 1660 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 AIM2O14862 343 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 NMT2O60551 498 aa6.38□□□□□ -1.39
PRPF4B-205ENST00000480058 DDHD2O94830 711 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms