RNA–Protein interactions for RNA: ENST00000478543.1

PDCD11-204, Transcript of programmed cell death 11, humanhuman

TSL 2

Gene PDCD11, Length 717 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD11-204ENST00000478543 HNRNPH3P31942 346 aaKnown RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 NDUFV1P49821 464 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 PDE6CP51160 858 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 ZNF132P52740 706 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 RAD23BP54727 409 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 HGSNATQ68CP4 663 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 OVOS1Q6IE37 1185 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 DPH6Q7L8W6 267 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TAS1R1Q7RTX1 841 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 ACOT1Q86TX2 421 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM86AQ8N2M4 240 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TTC39CQ8N584 583 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 SLC4A11Q8NBS3 891 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 SLC20A1Q8WUM9 679 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM169Q96HH4 297 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM176AQ96HP8 235 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 CHP1Q99653 195 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 BAG1Q99933 345 aaPredicted RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 LPIN3Q9BQK8 851 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 NT5C1AQ9BXI3 368 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 LMAN2LQ9H0V9 348 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 KCNF1Q9H3M0 494 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 DPEP3Q9H4B8 488 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 HAUS4Q9H6D7 363 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 DDX43Q9NXZ2 648 aaKnown RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 DSEQ9UL01 958 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 CNTN6Q9UQ52 1028 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 USP15Q9Y4E8 981 aaPredicted RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 PCDHB12Q9Y5F1 795 aa12.44□□□□□ -0.42
PDCD11-204ENST00000478543 PTPRZ1P23471 2315 aaPredicted RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 KMT2BQ9UMN6 2715 aaPredicted RBP12.44□□□□□ -0.42
PDCD11-204ENST00000478543 RIF1Q5UIP0 2472 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 FAM170AA1A519 330 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 SOWAHDA6NJG2 315 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 THAP12O43422 761 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CYP11A1P05108 521 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CYP11B1P15538 503 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 GNA15P30679 374 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 EIF4A3P38919 411 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CDR1P51861 262 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 PSMC1P62191 440 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CCZ1BP86790 482 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CCZ1P86791 482 aaPredicted RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 YWHAHQ04917 246 aaPredicted RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 PTK2Q05397 1052 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 ELAVL2Q12926 359 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 MEA1Q16626 185 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 CYP26C1Q6V0L0 522 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 ERMP1Q7Z2K6 904 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 ZNF571Q7Z3V5 609 aaPredicted RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 NOP9Q86U38 636 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 UNC93AQ86WB7 457 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM139Q8IV31 216 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 FMNL3Q8IVF7 1028 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 VN1R2Q8NFZ6 395 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 RPGRIP1Q96KN7 1286 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 HEXIM2Q96MH2 286 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 C11orf84Q9BUA3 381 aaPredicted RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 VN1R3Q9BXE9 311 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 SMOC2Q9H3U7 446 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 SEPT11Q9NVA2 429 aaKnown RBP12.43□□□□□ -0.42
PDCD11-204ENST00000478543 ARHGAP20Q9P2F6 1191 aa12.43□□□□□ -0.42
PDCD11-204ENST00000478543 MED19A0JLT2 244 aaPredicted RBP12.42□□□□□ -0.42
PDCD11-204ENST00000478543 GABRDO14764 452 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 SYN3O14994 580 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 ATP2C2O75185 946 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 FGF18O76093 207 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 RB1P06400 928 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 MMEP08473 750 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 PAEPP09466 180 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 FAM163BP0C2L3 166 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 FGFR3P22607 806 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 PPM1AP35813 382 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 NBL1P41271 181 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 PRKCIP41743 596 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 LHX1P48742 406 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 BPIFB4P59827 614 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 MTF1Q14872 753 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 CCDC142Q17RM4 750 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 RTP2Q5QGT7 225 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 VARS2Q5ST30 1063 aaKnown RBP12.42□□□□□ -0.42
PDCD11-204ENST00000478543 THEM5Q8N1Q8 247 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM105Q8N8V8 129 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 KLHL23Q8NBE8 558 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 CCDC112Q8NEF3 446 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 EPS8L1Q8TE68 723 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 TFAP2BQ92481 460 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 TMEM209Q96SK2 561 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 AGPAT1Q99943 283 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 RTP3Q9BQQ7 232 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 SYT15Q9BQS2 421 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 TTPALQ9BTX7 342 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.42□□□□□ -0.42
PDCD11-204ENST00000478543 HERC2P3Q9BVR0 1158 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 DEF6Q9H4E7 631 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 FAM124BQ9H5Z6 455 aaPredicted RBP12.42□□□□□ -0.42
PDCD11-204ENST00000478543 NHEJ1Q9H9Q4 299 aaPredicted RBP12.42□□□□□ -0.42
PDCD11-204ENST00000478543 FAM49BQ9NUQ9 324 aa12.42□□□□□ -0.42
PDCD11-204ENST00000478543 NOCTQ9UK39 431 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms