RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 USP37Q86T82 979 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.28□□□□□ -1.72
HPS3-205ENST00000478525 PRSS3P2Q8NHM4 247 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 FAXDC2Q96IV6 333 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 NELL2Q99435 816 aa4.28□□□□□ -1.72
HPS3-205ENST00000478525 KLHL33A6NCF5 533 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 MYMKA6NI61 221 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 NPSP0C0P6 89 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 CCKARP32238 428 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 ABCB5Q2M3G0 1257 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 UAP1L1Q3KQV9 507 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 IRF2BP2Q7Z5L9 587 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 FAM46DQ8NEK8 389 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 ATG4AQ8WYN0 398 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 SLC46A1Q96NT5 459 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 PUS7LQ9H0K6 701 aaKnown RBP4.27□□□□□ -1.73
HPS3-205ENST00000478525 HESX1Q9UBX0 185 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 SSX2IPQ9Y2D8 614 aa4.27□□□□□ -1.73
HPS3-205ENST00000478525 IGKV2D-30A0A075B6S6 120 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 H7C1Q1 480 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 FZD9O00144 591 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 DCLK1O15075 740 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 FTH1P19P0C7X4 201 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 PDE1AP54750 535 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 MIDNQ504T8 468 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 SFRP4Q6FHJ7 346 aaPredicted RBP4.26□□□□□ -1.73
HPS3-205ENST00000478525 SHC4Q6S5L8 630 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 PIGOQ8TEQ8 1089 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 DAZAP1Q96EP5 407 aaKnown RBP4.26□□□□□ -1.73
HPS3-205ENST00000478525 TTYH3Q9C0H2 523 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 SLC5A4Q9NY91 659 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 ZDHHC8Q9ULC8 765 aa4.26□□□□□ -1.73
HPS3-205ENST00000478525 TLDC2A0PJX2 215 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 USP1O94782 785 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 FGBP02675 491 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 GNAI2P04899 355 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 MYBL2P10244 700 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 PIM1P11309 404 aaPredicted RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 CYP2A6P11509 494 aaPredicted RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 ATP5F1P24539 256 aaPredicted RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 GTF2H3Q13889 308 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 FAM160B1Q5W0V3 765 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 Q6ZWC4 215 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 PARS2Q7L3T8 475 aaKnown RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 MRPL10Q7Z7H8 261 aaKnown RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 C3orf20Q8ND61 904 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 RP9Q8TA86 221 aaKnown RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 GLG1Q92896 1179 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 TNPO1Q92973 898 aaKnown RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 COQ8BQ96D53 544 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 R3HDM4Q96D70 268 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 SCAF8Q9UPN6 1271 aaKnown RBP4.25□□□□□ -1.73
HPS3-205ENST00000478525 PCDHA3Q9Y5H8 950 aa4.25□□□□□ -1.73
HPS3-205ENST00000478525 PRR23D1E9PI22 279 aaPredicted RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 POC1B-GALNT4F8VUJ3 575 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 ADAM10O14672 748 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 TJP3O95049 919 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 PDE8BO95263 885 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 PRR23D2P0DMB1 279 aaPredicted RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 PPIFP30405 207 aaKnown RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 LOXL3P58215 753 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 CERKLQ49MI3 558 aaPredicted RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 LCE1EQ5T753 118 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 ARHGAP40Q5TG30 622 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 SDE2Q6IQ49 451 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 MEPCEQ7L2J0 689 aaKnown RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 NECAB2Q7Z6G3 386 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 GALNT4Q8N4A0 578 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 C16orf52Q8NHV5 167 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 DDX17Q92841 729 aaKnown RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 FAM118BQ9BPY3 351 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 THAP7Q9BT49 309 aaPredicted RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 MRPL46Q9H2W6 279 aaKnown RBP4.24□□□□□ -1.73
HPS3-205ENST00000478525 WDCPQ9H6R7 721 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 GLOD4Q9HC38 313 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 ABCF2Q9UG63 623 aa4.24□□□□□ -1.73
HPS3-205ENST00000478525 LY6G6EA0A0G2JKS1 128 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 A1L4Q6 167 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 FCHO1O14526 889 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 EXOC3O60645 756 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 AHSGP02765 367 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 CHRM5P08912 532 aaPredicted RBP4.23□□□□□ -1.73
HPS3-205ENST00000478525 IL1R2P27930 398 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 ADKP55263 362 aaKnown RBP4.23□□□□□ -1.73
HPS3-205ENST00000478525 TPTEP56180 551 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 LILRA4P59901 499 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 GPSM2P81274 684 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 NOGQ13253 232 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 PCBP2Q15366 365 aaKnown RBP eCLIP4.23□□□□□ -1.73
HPS3-205ENST00000478525 TRIM71Q2Q1W2 868 aaKnown RBP4.23□□□□□ -1.73
HPS3-205ENST00000478525 RGS7BPQ6MZT1 257 aaPredicted RBP4.23□□□□□ -1.73
HPS3-205ENST00000478525 KIAA1161Q6NSJ0 714 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 LAYNQ6UX15 382 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 PPP1R3BQ86XI6 285 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 NSMCE1Q8WV22 266 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 XAGE5Q8WWM1 108 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 VCPIP1Q96JH7 1222 aa4.23□□□□□ -1.73
HPS3-205ENST00000478525 FEZ2Q9UHY8 353 aaPredicted RBP4.23□□□□□ -1.73
HPS3-205ENST00000478525 MCM8Q9UJA3 840 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms