RNA–Protein interactions for RNA: ENST00000478423.6

NPHP4-208, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,467 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-208ENST00000478423 ZSCAN5CA6NGD5 496 aaPredicted RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 NKRFO15226 690 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 LUC7L3O95232 432 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 MCF2P10911 925 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 ATICP31939 592 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 DLG4P78352 724 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 IL1RL1Q01638 556 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 C1QBPQ07021 282 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 TMEM132BQ14DG7 1078 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 MORF4L2Q15014 288 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 TAF11Q15544 211 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 GRAMD1BQ3KR37 738 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 IL31Q6EBC2 164 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 EXD1Q8NHP7 514 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 SPATA20Q8TB22 786 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 ACTL9Q8TC94 416 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 ZNF473Q8WTR7 871 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 UPF3AQ9H1J1 476 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 PORCNQ9H237 461 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 WDCPQ9H6R7 721 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 AP3B1O00203 1094 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 GNGT2O14610 69 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 SNRPAP09012 282 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 UGP2Q16851 508 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 MIIPQ5JXC2 388 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 PPHLN1Q8NEY8 458 aaKnown RBP14.83□□□□□ -0.04
NPHP4-208ENST00000478423 KRT35Q92764 455 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 COPS5Q92905 334 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 PPCSQ9HAB8 311 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 PCMTD2Q9NV79 361 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 ARL2BPQ9Y2Y0 163 aa14.83□□□□□ -0.04
NPHP4-208ENST00000478423 PTGER2P43116 358 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MCL1Q07820 350 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 CCDC33Q8N5R6 958 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 PTPRN2Q92932 1015 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ZNF669Q96BR6 464 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 CATSPERBQ9H7T0 1116 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MARCOQ9UEW3 520 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 PPME1Q9Y570 386 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MEFVO15553 781 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MTSS1O43312 755 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 SKIP12755 728 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 AKAP5P24588 427 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 C10orf120Q5SQS8 335 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 C11orf63Q6NUN7 778 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MOB2Q70IA6 237 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 NOP9Q86U38 636 aaKnown RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MDM1Q8TC05 714 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 MIPOL1Q8TD10 442 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 EGFL8Q99944 293 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 TMEM121Q9BTD3 319 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ACP6Q9NPH0 428 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 USP18Q9UMW8 372 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 TRIM33Q9UPN9 1127 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ASTN1O14525 1302 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 POLBP06746 335 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 SERPINB9P50453 376 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 NDST1P52848 882 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 USP10Q14694 798 aaKnown RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ZNF384Q8TF68 577 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ARL8AQ96BM9 186 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 WWP1Q9H0M0 922 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 NDFIP2Q9NV92 336 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ZWINTO95229 277 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 RARGP13631 454 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ECM1Q16610 540 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 LRRC6Q86X45 466 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 HASPINQ8TF76 798 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 DDX50Q9BQ39 737 aaKnown RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 TRPV6Q9H1D0 765 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 ANKZF1Q9H8Y5 726 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 CYP4F11Q9HBI6 524 aa14.82□□□□□ -0.04
NPHP4-208ENST00000478423 BARX2Q9UMQ3 279 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-208ENST00000478423 FRMD3A2A2Y4 597 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 C2CD2LO14523 706 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 GTF2BQ00403 316 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 SATB1Q01826 763 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 USP50Q70EL3 339 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 MIB1Q86YT6 1006 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TMEM161BQ8NDZ6 487 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TFB1MQ8WVM0 346 aaKnown RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TSPAN16Q9UKR8 245 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 FARP1Q9Y4F1 1045 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 YDJCA8MPS7 323 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TRPA1O75762 1119 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 ATXN8OSP0DMR3 200 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TLK2Q86UE8 772 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 PCSK9Q8NBP7 692 aaKnown RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 HDAC7Q8WUI4 952 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TSSK1BQ9BXA7 367 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 RRAGCQ9HB90 399 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 HACD3Q9P035 362 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 FAM8A1Q9UBU6 413 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 MOSPD1Q9UJG1 213 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 LSM7Q9UK45 103 aaKnown RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 TIMM13Q9Y5L4 95 aaPredicted RBP14.81□□□□□ -0.04
NPHP4-208ENST00000478423 KCNMA1Q12791 1236 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 ACVR2BQ13705 512 aa14.81□□□□□ -0.04
NPHP4-208ENST00000478423 C1orf146Q5VVC0 180 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms