RNA–Protein interactions for RNA: ENST00000478420.1

SMARCA1-204, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 3

Gene SMARCA1, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-204ENST00000478420 LAIR1Q6GTX8 287 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 VWA1Q6PCB0 445 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 Q6ZNX1 250 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 AMER2Q8N7J2 671 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 OR56A3Q8NH54 315 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 LINC00476Q8WZB0 136 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 LPIN2Q92539 896 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 FAM136AQ96C01 138 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 TBCBQ99426 244 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 ACTRT3Q9BYD9 372 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 AMBRA1Q9C0C7 1298 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 SYBUQ9NX95 663 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 HDAC9Q9UKV0 1011 aa4.8□□□□□ -1.64
SMARCA1-204ENST00000478420 GRID2IPA4D2P6 1211 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 PROM1O43490 865 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 IL18RAPO95256 599 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 ESRRBO95718 433 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 MYL3P08590 195 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 HNRNPMP52272 730 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 SEC24CP53992 1094 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 KLF10Q13118 480 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 MPP3Q13368 585 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 DAG1Q14118 895 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 E2F2Q14209 437 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 ARHGAP40Q5TG30 622 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 VPS53Q5VIR6 699 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 IL31Q6EBC2 164 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 TSHZ1Q6ZSZ6 1077 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 ZNF280BQ86YH2 543 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 FAM109AQ8N4B1 249 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 SLC16A11Q8NCK7 471 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 BEND2Q8NDZ0 799 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 MYCBPAPQ8TBZ2 947 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 IPCEF1Q8WWN9 437 aaPredicted RBP4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 FBXL20Q96IG2 436 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 PGBD1Q96JS3 809 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 PPP1R9BQ96SB3 815 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 TTPALQ9BTX7 342 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 BRIP1Q9BX63 1249 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 NAA15Q9BXJ9 866 aaKnown RBP4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 SCAND2PQ9GZW5 306 aaPredicted RBP4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 ITGB1BP2Q9UKP3 347 aa4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 EPN1Q9Y6I3 576 aaPredicted RBP4.79□□□□□ -1.64
SMARCA1-204ENST00000478420 LOC102723971A0A1B0GUV8 181 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 CCDC194A0A1B0GVG4 234 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 F8W8V4 182 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 hCG_1984214I3L0E3 225 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 KPNA5O15131 536 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 PARP1P09874 1014 aaKnown RBP4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 KRT4P19013 534 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 FOLR3P41439 243 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 PRIM2P49643 509 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 ZNF543Q08ER8 600 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 FSTL1Q12841 308 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 MYO1EQ12965 1108 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 INSCQ1MX18 579 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 NBPF8Q3BBV2 869 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 HECTD2Q5U5R9 776 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 RGS7BPQ6MZT1 257 aaPredicted RBP4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 Q6ZPA2 131 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 UNC13DQ70J99 1090 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 MRGPRGQ86SM5 289 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 YAF2Q8IY57 180 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 SDR16C5Q8N3Y7 309 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 SNX22Q96L94 193 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 TOR3AQ9H497 397 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 SERHLQ9NQF3 203 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 XPNPEP3Q9NQH7 507 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 LRIT1Q9P2V4 623 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 SERTAD3Q9UJW9 196 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 PACSIN3Q9UKS6 424 aa4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 NDRG4Q9ULP0 352 aaKnown RBP4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 MRPS17Q9Y2R5 130 aaKnown RBP4.78□□□□□ -1.64
SMARCA1-204ENST00000478420 POM121BA6NF01 834 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 PPM1DO15297 605 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 FOXN1O15353 648 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 MPPED1O15442 326 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 RAMP2O60895 175 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 RHOBTB3O94955 611 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 GCP02774 474 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 MT-ND5P03915 603 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 CHRM2P08172 466 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 TXNP10599 105 aaKnown RBP4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 MPLP40238 635 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 CARSP49589 748 aaKnown RBP4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 CASP5P51878 434 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 NEK3P51956 506 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 DGKEP52429 567 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 PRKAG1P54619 331 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 AK2P54819 239 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 INHBCP55103 352 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 MRPS35P82673 323 aaKnown RBP4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 DPTQ07507 201 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 HDAC1Q13547 482 aaPredicted RBP4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 PTPRRQ15256 657 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 LONRF1Q17RB8 773 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 ZIK1Q3SY52 487 aaPredicted RBP4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 KAZNQ674X7 775 aa4.77□□□□□ -1.65
SMARCA1-204ENST00000478420 ZDHHC24Q6UX98 284 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms