RNA–Protein interactions for RNA: ENST00000478254.5

GFM1-207, Transcript of G elongation factor mitochondrial 1, humanhuman

TSL 5

Gene GFM1, Length 3,470 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-207ENST00000478254 CIITAP33076 1130 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 GRIA2P42262 883 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 HSPA2P54652 639 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 PRAMEP78395 509 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 PPIDQ08752 370 aaKnown RBP11.92□□□□□ -0.5
GFM1-207ENST00000478254 SNRNP35Q16560 246 aaKnown RBP11.92□□□□□ -0.5
GFM1-207ENST00000478254 CCNG2Q16589 344 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 XKR9Q5GH70 373 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 PLA2G4FQ68DD2 849 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 TXNRD3NBQ6F5E7 133 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 SCARA5Q6ZMJ2 495 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 CD101Q93033 1021 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 PTCD3Q96EY7 689 aaKnown RBP11.92□□□□□ -0.5
GFM1-207ENST00000478254 ACCSQ96QU6 501 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 NR1H4Q96RI1 486 aaPredicted RBP11.92□□□□□ -0.5
GFM1-207ENST00000478254 SRPK1Q96SB4 655 aaKnown RBP11.92□□□□□ -0.5
GFM1-207ENST00000478254 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
GFM1-207ENST00000478254 TCRBV7S3A2A0A539 114 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 H7C0C1 242 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ZSCAN9O15535 394 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 RAD17O75943 681 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ASLP04424 464 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CD19P15391 556 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ELK3P41970 407 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ATP5OP48047 213 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 GK3PQ14409 553 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CTC1Q2NKJ3 1217 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 TRMT5Q32P41 509 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 CCDC88AQ3V6T2 1871 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 BRDTQ58F21 947 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 VWA5B1Q5TIE3 1220 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 NXNQ6DKJ4 435 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 C1orf228Q6PIY5 440 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 DHDDSQ86SQ9 333 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 MCOLN2Q8IZK6 566 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 NDUFAF2Q8N183 169 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 PLEKHO2Q8TD55 490 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 USP13Q92995 863 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 CAAP1Q9H8G2 361 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 WRAP73Q9P2S5 460 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 TAGLN3Q9UI15 199 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 PAIP2BQ9ULR5 123 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 MEIS2O14770 477 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 PRPF4O43172 522 aaKnown RBP eCLIP11.91□□□□□ -0.5
GFM1-207ENST00000478254 CST8O60676 142 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 HNRNPCL1O60812 293 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 CYP3A4P08684 503 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ARP10275 920 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 MYCLP12524 364 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 KCNA4P22459 653 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 SOX11P35716 441 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CBX3Q13185 183 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 LSAMPQ13449 338 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 NRF1Q16656 503 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 KRT39Q6A163 491 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 C1orf186Q6ZWK4 172 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.91□□□□□ -0.5
GFM1-207ENST00000478254 WWP1Q9H0M0 922 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CD209Q9NNX6 404 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 DDX4Q9NQI0 724 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 PHF24Q9UPV7 400 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CICQ96RK0 1608 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 GOLGA8QA0A0J9YX86 632 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 GOLGA8OA6NCC3 632 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 GOLGA8NF8WBI6 632 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 hCG_1984214I3L0E3 225 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 XPOTO43592 962 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 ECE2O60344 883 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 CYP1A2P05177 515 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 GZMAP12544 262 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 FGFR3P22607 806 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 GPX6P59796 221 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 RPL10AP62906 217 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 DARS2Q6PI48 645 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 NCAPG2Q86XI2 1143 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ZNF713Q8N859 430 aaPredicted RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 FBXL13Q8NEE6 735 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 BTBD7Q9P203 1132 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 ZNF180Q9UJW8 692 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 NOCTQ9UK39 431 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 ADAMTS6Q9UKP5 1117 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 APOBEC2Q9Y235 224 aaKnown RBP11.91□□□□□ -0.5
GFM1-207ENST00000478254 ACTL7BQ9Y614 415 aa11.91□□□□□ -0.5
GFM1-207ENST00000478254 TYROBPO43914 113 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 ACOT2P49753 483 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 GDF10P55107 478 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 NCKAP1LP55160 1127 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 PSMC5P62195 406 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 MRPS22P82650 360 aaKnown RBP11.9□□□□□ -0.5
GFM1-207ENST00000478254 LMNB2Q03252 620 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 NFIAQ12857 509 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 OASLQ15646 514 aaKnown RBP11.9□□□□□ -0.5
GFM1-207ENST00000478254 NADK2Q4G0N4 442 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 GRAMD4Q6IC98 578 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 SYDE1Q6ZW31 735 aaPredicted RBP11.9□□□□□ -0.5
GFM1-207ENST00000478254 PGBD4Q96DM1 585 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 FIS1Q9Y3D6 152 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 HEY1Q9Y5J3 304 aa11.9□□□□□ -0.5
GFM1-207ENST00000478254 KCPQ6ZWJ8 1503 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms