RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 GAS2O43903 313 aaKnown RBP19■□□□□ 0.63
CCM2-209ENST00000477605 EDN1P05305 212 aa19■□□□□ 0.63
CCM2-209ENST00000477605 RPA3P35244 121 aaPredicted RBP19■□□□□ 0.63
CCM2-209ENST00000477605 HMGCS2P54868 508 aa19■□□□□ 0.63
CCM2-209ENST00000477605 CRYMQ14894 314 aa19■□□□□ 0.63
CCM2-209ENST00000477605 NBPF12Q5TAG4 269 aaPredicted RBP19■□□□□ 0.63
CCM2-209ENST00000477605 IER5Q5VY09 327 aa19■□□□□ 0.63
CCM2-209ENST00000477605 ADGRD1Q6QNK2 874 aa19■□□□□ 0.63
CCM2-209ENST00000477605 MAB21L3Q8N8X9 362 aa19■□□□□ 0.63
CCM2-209ENST00000477605 PYROXD1Q8WU10 500 aa19■□□□□ 0.63
CCM2-209ENST00000477605 TMEM121Q9BTD3 319 aa19■□□□□ 0.63
CCM2-209ENST00000477605 AGTPBP1Q9UPW5 1226 aa19■□□□□ 0.63
CCM2-209ENST00000477605 WDR81Q562E7 1941 aa19■□□□□ 0.63
CCM2-209ENST00000477605 TM9SF1O15321 606 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 MSCO60682 206 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 WEE2P0C1S8 567 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 GPX6P59796 221 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 SLC25A11Q02978 314 aaKnown RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 ACAP1Q15027 740 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 SLC45A4Q5BKX6 768 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 CDCA2Q69YH5 1023 aaPredicted RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 NAT8LQ8N9F0 302 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 FAM167AQ96KS9 214 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 ACSS3Q9H6R3 686 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 CYLDQ9NQC7 956 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 CPSF3Q9UKF6 684 aaKnown RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 CHKBQ9Y259 395 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 TRAFD1O14545 582 aaPredicted RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 IFNB1P01574 187 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 PSMA2P25787 234 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 CTCFP49711 727 aaPredicted RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 MYO1EQ12965 1108 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 SLC1A5Q15758 541 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 TXNRD3NBQ6F5E7 133 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 NSMCE1Q8WV22 266 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 C10orf82Q8WW14 230 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 ERP27Q96DN0 273 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 ACO2Q99798 780 aaKnown RBP18.99■□□□□ 0.63
CCM2-209ENST00000477605 MTMR12Q9C0I1 747 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 HACL1Q9UJ83 578 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 STK38LQ9Y2H1 464 aa18.99■□□□□ 0.63
CCM2-209ENST00000477605 DDNO94850 711 aaPredicted RBP18.98■□□□□ 0.63
CCM2-209ENST00000477605 KRT3P12035 628 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 ATP2A2P16615 1042 aaKnown RBP18.98■□□□□ 0.63
CCM2-209ENST00000477605 OTUD4Q01804 1114 aaKnown RBP18.98■□□□□ 0.63
CCM2-209ENST00000477605 RNASELQ05823 741 aaKnown RBP18.98■□□□□ 0.63
CCM2-209ENST00000477605 CBLBQ13191 982 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 ACCSLQ4AC99 568 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 FYB2Q5VWT5 728 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 C4orf33Q8N1A6 199 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 ACTL9Q8TC94 416 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 CPT1BQ92523 772 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 ZNF75CPQ92670 426 aaPredicted RBP18.98■□□□□ 0.63
CCM2-209ENST00000477605 TCHPQ9BT92 498 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 C2orf40Q9H1Z8 148 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 L3MBTL1Q9Y468 752 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 CLUHO75153 1309 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 WDR90Q96KV7 1748 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 PHIPQ8WWQ0 1821 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 DOCK1Q14185 1865 aa18.98■□□□□ 0.63
CCM2-209ENST00000477605 LOC102724159A0A0B4J2E5 919 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 E7ENQ6 273 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 C2CD2LO14523 706 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 KIF1CO43896 1103 aaKnown RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 EGFRP00533 1210 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 HARSP12081 509 aaKnown RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 KDELR1P24390 212 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 TNFSF9P41273 254 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 STAT5BP51692 787 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 MXD4Q14582 209 aaPredicted RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 PWP2Q15269 919 aaKnown RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 ZNF699Q32M78 642 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 WDR78Q5VTH9 848 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 ZBTB8OSQ8IWT0 167 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 SH3TC2Q8TF17 1288 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 PRPF31Q8WWY3 499 aaKnown RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 RSAD2Q8WXG1 361 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 TFAP2BQ92481 460 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 WRNIP1Q96S55 665 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 PCYT2Q99447 389 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 MAK16Q9BXY0 300 aaKnown RBP18.97■□□□□ 0.63
CCM2-209ENST00000477605 VPS11Q9H270 941 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 SAR1AQ9NR31 198 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 GRID1Q9ULK0 1009 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 RLFQ13129 1914 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 B4GALT4O60513 344 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 TNNC2P02585 160 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 KRT4P19013 534 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 SEZ6Q53EL9 994 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 LVRNQ6Q4G3 990 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 HAUS1Q96CS2 278 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 TUBB6Q9BUF5 446 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 KIF9Q9HAQ2 790 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 TRIM33Q9UPN9 1127 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 SSC5DA1L4H1 1573 aa18.97■□□□□ 0.63
CCM2-209ENST00000477605 A0A1W2PPM1 405 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 SPDYE16A6NNV3 312 aaPredicted RBP18.96■□□□□ 0.63
CCM2-209ENST00000477605 FZD9O00144 591 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 CST8O60676 142 aa18.96■□□□□ 0.63
CCM2-209ENST00000477605 LRCH4O75427 683 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms