RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 LZTR1Q8N653 840 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CPSF7Q8N684 471 aaKnown RBP13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SCFD1Q8WVM8 642 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PLIN2Q99541 437 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 IMPG2Q9BZV3 1241 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 EPB41L4BQ9H329 900 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 LRRC4CQ9HCJ2 640 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 RRN3Q9NYV6 651 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 FEM1BQ9UK73 627 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PCDHA12Q9UN75 941 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PITPNM2Q9BZ72 1349 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 FZD9O00144 591 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 MEIS2O14770 477 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 DAPK3O43293 454 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 AQP9O43315 295 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 CRYZL1O95825 349 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PPP1R2P41236 205 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 GMPSP49915 693 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 AP2B1P63010 937 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PPP2R5CQ13362 524 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 BTBD8Q5XKL5 378 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SV2BQ7L1I2 683 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 MICALL2Q8IY33 904 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SPARTQ8N0X7 666 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 ELMOD1Q8N336 334 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 DTX3LQ8TDB6 740 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 VMP1Q96GC9 406 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PSKH2Q96QS6 385 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 C7orf25Q9BPX7 421 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 HAUS8Q9BT25 410 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 SENP6Q9GZR1 1112 aaPredicted RBP13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 EBF3Q9H4W6 596 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 PLAGL2Q9UPG8 496 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 GJA3Q9Y6H8 435 aa13.25□□□□□ -0.29
RTFDC1-207ENST00000477573 GOLGA8MH3BSY2 632 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 AP3B1O00203 1094 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 EDIL3O43854 480 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PHF2O75151 1096 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 RHOBTB3O94955 611 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 FKBP9O95302 570 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 FUCA1P04066 466 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ABCB1P08183 1280 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 MAGEA1P43355 309 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 EPHA7Q15375 998 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KCNJ8Q15842 424 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ANKRD20A4Q4UJ75 823 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SLC45A4Q5BKX6 768 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 POTEHQ6S545 545 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 UGT2A3Q6UWM9 527 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ARHGEF18Q6ZSZ5 1173 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF410Q86VK4 478 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 LINC00469Q8N7U9 141 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ANGPTL6Q8NI99 470 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SNX29Q8TEQ0 813 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 BTBD9Q96Q07 612 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PITPNM3Q9BZ71 974 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ARMC1Q9NVT9 282 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 THAP1Q9NVV9 213 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 RABGEF1Q9UJ41 708 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 EXOC7Q9UPT5 735 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KDM3AQ9Y4C1 1321 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PVALEFA0A1B0GWK0 134 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 RGS13O14921 159 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 GSC2O15499 205 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 B3GALNT1O75752 331 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PGM3O95394 542 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT6AP02538 564 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT6BP04259 564 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CTRB1P17538 263 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 HOXA7P31268 230 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 VCPP55072 806 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SNAP25P60880 206 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ARHGAP4P98171 946 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT76Q01546 638 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 DPYSQ14117 519 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ZNF829Q3KNS6 432 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CDONQ4KMG0 1287 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CTRB2Q6GPI1 263 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 DCLRE1AQ6PJP8 1040 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 KRT26Q7Z3Y9 468 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CDAN1Q8IWY9 1227 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SMYD4Q8IYR2 804 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 ANKRD13AQ8IZ07 590 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PCYOX1LQ8NBM8 494 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 HCAR2Q8TDS4 363 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 TMA16Q96EY4 203 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CCDC138Q96M89 665 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 MBOAT7Q96N66 472 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 MIPEPQ99797 713 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 UQCC2Q9BRT2 126 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SHCBP1LQ9BZQ2 653 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 NT5C3AQ9H0P0 336 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SNX25Q9H3E2 840 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 EHMT1Q9H9B1 1298 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 CCDC177Q9NQR7 707 aaPredicted RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 PADI4Q9UM07 663 aa13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 NOSIPQ9Y314 301 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 MRPL11Q9Y3B7 192 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.24□□□□□ -0.29
RTFDC1-207ENST00000477573 LINC00854A0A1B0GVQ3 168 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms