RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	USP44	Q9H0E7	712 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	LRMDA	Q9H2I8	198 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	SLITRK6	Q9H5Y7	841 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	ROPN1	Q9HAT0	212 aa	Predicted RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	PARVB	Q9HBI1	364 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	METTL14	Q9HCE5	456 aa	Known RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	EPB41L5	Q9HCM4	733 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	IL1RAPL2	Q9NP60	686 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	ERVK13-1	Q9NX77	482 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	SUCLA2	Q9P2R7	463 aa	Predicted RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	DKK3	Q9UBP4	350 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	PARP2	Q9UGN5	583 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	SUSD2	Q9UGT4	822 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	ACSL6	Q9UKU0	697 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	G3BP2	Q9UN86	482 aa	Known RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	R3HDM2	Q9Y2K5	976 aa	Known RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	DIS3	Q9Y2L1	958 aa	Known RBP	5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	TTLL3	Q9Y4R7	772 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	HCFC2	Q9Y5Z7	792 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	CLIC4	Q9Y696	253 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	NFS1	Q9Y697	457 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	AK5	Q9Y6K8	562 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	COL15A1	P39059	1388 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	RREB1	Q92766	1687 aa		5.02	□□□□□ -1.61
PTCD3-212	ENST00000477520	PDS5A	Q29RF7	1337 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PASK	Q96RG2	1323 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	UBR3	Q6ZT12	1888 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PI4KAP2	A4QPH2	592 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	IQCA1L	A6NCM1	817 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	LGALS16	A8MUM7	142 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	BTNL10	A8MVZ5	291 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520		A8MXQ7	604 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	NDC80	O14777	642 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	RGS13	O14921	159 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DCTN3	O75935	186 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CTDNEP1	O95476	244 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	BPNT1	O95861	308 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	OAS1	P00973	400 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	ANXA1	P04083	346 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	IBSP	P21815	317 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	STIP1	P31948	543 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	HPD	P32754	393 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CNR2	P34972	360 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	LIFR	P42702	1097 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	MMP13	P45452	471 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SCNN1B	P51168	640 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DRG2	P55039	364 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	HDAC4	P56524	1084 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	HERVK_113	P62684	666 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	IRX4	P78413	519 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	GPSM2	P81274	684 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	ZNF844	Q08AG5	666 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	C2orf54	Q08AI8	447 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PNOC	Q13519	176 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DCTN2	Q13561	401 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	R3HDM1	Q15032	1099 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SAFB	Q15424	915 aa	Known RBP eCLIP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CNGA3	Q16281	694 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	BCL2A1	Q16548	175 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PROSER3	Q2NL68	480 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	LONRF3	Q496Y0	759 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	LIN52	Q52LA3	116 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	TCP11X2	Q5H9J9	407 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	NBPF12	Q5TAG4	269 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SLC9C2	Q5TAH2	1124 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	TSHZ3	Q63HK5	1081 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DNAJC14	Q6Y2X3	702 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	NLGN1	Q8N2Q7	840 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	MB21D1	Q8N884	522 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PI4KAP1	Q8N8J0	262 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SYT2	Q8N9I0	419 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	TBC1D16	Q8TBP0	767 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	ZNF398	Q8TD17	642 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	LRRC8C	Q8TDW0	803 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CPLX3	Q8WVH0	158 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SREK1	Q8WXA9	508 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	GATAD2B	Q8WXI9	593 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	ATP6V0A1	Q93050	837 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	FERMT2	Q96AC1	680 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	EFHD2	Q96C19	240 aa	Predicted RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CAPZA3	Q96KX2	299 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DHRS1	Q96LJ7	313 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	CCDC42	Q96M95	316 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	RUNDC3B	Q96NL0	473 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	RPS6KC1	Q96S38	1066 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	HNRNPAB	Q99729	332 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SH3GL1	Q99961	368 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	FAM167B	Q9BTA0	163 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	FSD1	Q9BTV5	496 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	TRAIP	Q9BWF2	469 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PRDM14	Q9GZV8	571 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	DDX47	Q9H0S4	455 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SH2D4A	Q9H788	454 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SAR1A	Q9NR31	198 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SAMSN1	Q9NSI8	373 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	INTS9	Q9NV88	658 aa	Known RBP	5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	SMPD4	Q9NXE4	827 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	PLK2	Q9NYY3	685 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	BTBD7	Q9P203	1132 aa		5.01	□□□□□ -1.61
PTCD3-212	ENST00000477520	MAGEC2	Q9UBF1	373 aa	Predicted RBP	5.01	□□□□□ -1.61

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