RNA–Protein interactions for RNA: ENST00000477461.1

UBR3-209, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 4

Gene UBR3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-209ENST00000477461 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 PLEKHD1A6NEE1 506 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 KIF22Q14807 665 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 LLGL1Q15334 1064 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 KIAA1614Q5VZ46 1190 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 TMEM108Q6UXF1 575 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 ZNF551Q7Z340 670 aaPredicted RBP5.21□□□□□ -1.58
UBR3-209ENST00000477461 PPP1R3BQ86XI6 285 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 FAM90A1Q86YD7 464 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 C1QTNF7Q9BXJ2 289 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 TTYH3Q9C0H2 523 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 RLIMQ9NVW2 624 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 POLHQ9Y253 713 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 MAP3K1Q13233 1512 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 KDM5BQ9UGL1 1544 aa5.21□□□□□ -1.58
UBR3-209ENST00000477461 ATP10BO94823 1461 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 EHBP1L1Q8N3D4 1523 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 LINC01548A6NM66 108 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 CHEK2O96017 543 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 FTLP02792 175 aaPredicted RBP5.2□□□□□ -1.58
UBR3-209ENST00000477461 CYP2D6P10635 497 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 CYP2C18P33260 490 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 ALDH9A1P49189 494 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 NOGQ13253 232 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 ZNF626Q68DY1 528 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 CPA6Q8N4T0 437 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 FANCBQ8NB91 859 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 QTRT1Q9BXR0 403 aaKnown RBP5.2□□□□□ -1.58
UBR3-209ENST00000477461 MRPL46Q9H2W6 279 aaKnown RBP5.2□□□□□ -1.58
UBR3-209ENST00000477461 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.2□□□□□ -1.58
UBR3-209ENST00000477461 CACNA1IQ9P0X4 2223 aa5.2□□□□□ -1.58
UBR3-209ENST00000477461 TP73O15350 636 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 GNAI2P04899 355 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 KELP23276 732 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 PCSK6P29122 969 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 LIPAP38571 399 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 FXR1P51114 621 aaKnown RBP eCLIP5.19□□□□□ -1.58
UBR3-209ENST00000477461 CLCN2P51788 898 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 ZNF134P52741 427 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 EXOSC9Q06265 439 aaKnown RBP5.19□□□□□ -1.58
UBR3-209ENST00000477461 SLC10A2Q12908 348 aaPredicted RBP5.19□□□□□ -1.58
UBR3-209ENST00000477461 ZNF66Q6ZN08 573 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 MAVSQ7Z434 540 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 ZNF366Q8N895 744 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 ATRIPQ8WXE1 791 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 RGMAQ96B86 450 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 CHMP4CQ96CF2 233 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 SLC46A1Q96NT5 459 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 SIK2Q9H0K1 926 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 TCF7L1Q9HCS4 588 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.19□□□□□ -1.58
UBR3-209ENST00000477461 LMBRD1Q9NUN5 540 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 FLRT1Q9NZU1 646 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 SUPT6HQ7KZ85 1726 aaKnown RBP5.19□□□□□ -1.58
UBR3-209ENST00000477461 LRRC9Q6ZRR7 1453 aa5.19□□□□□ -1.58
UBR3-209ENST00000477461 TROQ12816 1431 aaPredicted RBP5.18□□□□□ -1.58
UBR3-209ENST00000477461 H3BUI4 141 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 QSOX1O00391 747 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 HDCP19113 662 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 MAP2K6P52564 334 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 HK3P52790 923 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 PDE1AP54750 535 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 ETFDHQ16134 617 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 CCDC157Q569K6 752 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 PCID2Q5JVF3 399 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 TREML2Q5T2D2 321 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 CEP85Q6P2H3 762 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 NAPRTQ6XQN6 538 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 BHLHA9Q7RTU4 235 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 PPP1R32Q7Z5V6 425 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 YTHDF3Q7Z739 585 aaKnown RBP5.18□□□□□ -1.58
UBR3-209ENST00000477461 CATIPQ7Z7H3 387 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 WDCPQ9H6R7 721 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 FEZ2Q9UHY8 353 aaPredicted RBP5.18□□□□□ -1.58
UBR3-209ENST00000477461 SERTAD3Q9UJW9 196 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 KIF14Q15058 1648 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 WDR7Q9Y4E6 1490 aa5.18□□□□□ -1.58
UBR3-209ENST00000477461 SOAT2O75908 522 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 JTBO76095 146 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 SNUPNO95149 360 aaKnown RBP5.17□□□□□ -1.58
UBR3-209ENST00000477461 ARIH2O95376 493 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 FTH1P19P0C7X4 201 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 ENGP17813 658 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 NEK2P51955 445 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 KLF9Q13886 244 aaPredicted RBP5.17□□□□□ -1.58
UBR3-209ENST00000477461 PROSER3Q2NL68 480 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 CEP78Q5JTW2 689 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 TMEM240Q5SV17 173 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 THEMIS2Q5TEJ8 643 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 PRAMEF17Q5VTA0 474 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 FAM160B1Q5W0V3 765 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 SLC29A4Q7RTT9 530 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 FAM109AQ8N4B1 249 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 REPS1Q96D71 796 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 CAMKK2Q96RR4 588 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 MACROD1Q9BQ69 325 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 PNPOQ9NVS9 261 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 DLL3Q9NYJ7 618 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 MAPKBP1O60336 1514 aa5.17□□□□□ -1.58
UBR3-209ENST00000477461 E2F8A0AVK6 867 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms