RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 KCNB2Q92953 911 aa16.65■□□□□ 0.26
SMG5-204ENST00000476954 ATP2A3Q93084 1043 aa16.65■□□□□ 0.26
SMG5-204ENST00000476954 HSFX1Q9UBD0 423 aa16.65■□□□□ 0.26
SMG5-204ENST00000476954 APOBEC2Q9Y235 224 aaKnown RBP16.65■□□□□ 0.26
SMG5-204ENST00000476954 MUC22E2RYF6 1773 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 TADA3O75528 432 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 CXCL8P10145 99 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 TYMPP19971 482 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 TIE1P35590 1138 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 DPP6P42658 865 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 ABCG1P45844 678 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 USP4Q13107 963 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 STK3Q13188 491 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 TOB2Q14106 344 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 ZNF268Q14587 947 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 ZC2HC1CQ53FD0 456 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 SPDYCQ5MJ68 293 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 SDHAF4Q5VUM1 108 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 MPZL3Q6UWV2 235 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 TMPRSS7Q7RTY8 843 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 LRRTM3Q86VH5 581 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 SLC41A1Q8IVJ1 513 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 FAM177A1Q8N128 213 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 IL17RCQ8NAC3 791 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 SPRYD3Q8NCJ5 442 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 MTMR9Q96QG7 549 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 MRPL4Q9BYD3 311 aaKnown RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 TUFT1Q9NNX1 390 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 ZMYM5Q9UJ78 669 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 MAGED2Q9UNF1 606 aaPredicted RBP16.64■□□□□ 0.25
SMG5-204ENST00000476954 PHLPP2Q6ZVD8 1323 aa16.64■□□□□ 0.25
SMG5-204ENST00000476954 TCRBV21S2A2A0A5A6 115 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 FAM149AA5PLN7 773 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 CCDC169A6NNP5 214 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 PYCARD-AS1I3L0S3 204 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 J3QKU1 62 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 CBFA2T3O75081 653 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 HAPLN1P10915 354 aaPredicted RBP16.63■□□□□ 0.25
SMG5-204ENST00000476954 DDX6P26196 483 aaKnown RBP eCLIP16.63■□□□□ 0.25
SMG5-204ENST00000476954 PEX3P56589 373 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 ZNF33AQ06730 810 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 LMBRD2Q68DH5 695 aaPredicted RBP16.63■□□□□ 0.25
SMG5-204ENST00000476954 MRPS31Q92665 395 aaKnown RBP16.63■□□□□ 0.25
SMG5-204ENST00000476954 SENP8Q96LD8 212 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 ZCWPW1Q9H0M4 648 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 TMEM60Q9H2L4 133 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 TRPC7Q9HCX4 862 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 PTPN13Q12923 2485 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 SCN1AP35498 2009 aa16.63■□□□□ 0.25
SMG5-204ENST00000476954 AP5Z1O43299 807 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 ADAM23O75077 832 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 ATXN1LP0C7T5 689 aaKnown RBP16.62■□□□□ 0.25
SMG5-204ENST00000476954 NPTX2P47972 431 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 SLC6A11P48066 632 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 MRPS21P82921 87 aaKnown RBP16.62■□□□□ 0.25
SMG5-204ENST00000476954 FAM160A1Q05DH4 1040 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 SLC14A1Q13336 389 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 CAMK2BQ13554 666 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 ZBTB6Q15916 424 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 CCDC26Q8TAB7 109 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 TNFRSF25Q93038 417 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 TOR4AQ9NXH8 423 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 ABI2Q9NYB9 513 aaPredicted RBP16.62■□□□□ 0.25
SMG5-204ENST00000476954 PCOLCE2Q9UKZ9 415 aa16.62■□□□□ 0.25
SMG5-204ENST00000476954 TCHHQ07283 1943 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 SYPP08247 313 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 NR1H3Q13133 447 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 PLEKHG6Q3KR16 790 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 GLRX5Q86SX6 157 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 SH3RF2Q8TEC5 729 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 KIFAP3Q92845 792 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 PRORYQ9H606 182 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 STK24Q9Y6E0 443 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 KNL1Q8NG31 2342 aa16.61■□□□□ 0.25
SMG5-204ENST00000476954 GOLGA8CPA6NN73 597 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 NEMFO60524 1076 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 CKMP06732 381 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 ODC1P11926 461 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 LILRA4P59901 499 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 ECM1Q16610 540 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 SKAP1Q86WV1 359 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 DAW1Q8N136 415 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 ARL14EPQ8N8R7 260 aaPredicted RBP16.6■□□□□ 0.25
SMG5-204ENST00000476954 TRIML1Q8N9V2 468 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 LRRC15Q8TF66 581 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 SETD7Q8WTS6 366 aaKnown RBP16.6■□□□□ 0.25
SMG5-204ENST00000476954 ERLEC1Q96DZ1 483 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 HSPA12BQ96MM6 686 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 PNMA5Q96PV4 448 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 HAPLN2Q9GZV7 340 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 IL21RQ9HBE5 538 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 TMLHEQ9NVH6 421 aa16.6■□□□□ 0.25
SMG5-204ENST00000476954 KIAA1522Q9P206 1035 aaPredicted RBP16.6■□□□□ 0.25
SMG5-204ENST00000476954 DAXXQ9UER7 740 aaPredicted RBP16.6■□□□□ 0.25
SMG5-204ENST00000476954 TTC26A0AVF1 554 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 SCAMP3O14828 347 aaKnown RBP16.59■□□□□ 0.25
SMG5-204ENST00000476954 TNFSF9P41273 254 aa16.59■□□□□ 0.25
SMG5-204ENST00000476954 KIR2DL1P43626 348 aaPredicted RBP16.59■□□□□ 0.25
SMG5-204ENST00000476954 BYSLQ13895 437 aaKnown RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms