RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 COL4A6Q14031 1691 aa30.5■■■□□ 2.47
VEGFA-211ENST00000476772 TULP2O00295 520 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 TADA2AO75478 443 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 AMHP03971 560 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 ERBB2P04626 1255 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 PCSK1P29120 753 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 PDE4CQ08493 712 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 MESDQ14696 234 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 OVOS1Q6IE37 1185 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 C11orf63Q6NUN7 778 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 PEX26Q7Z412 305 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 FUKQ8N0W3 1084 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 ANKRD52Q8NB46 1076 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 MSANTD4Q8NCY6 345 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 TRIM7Q9C029 511 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 SYNCQ9H7C4 482 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 MRPL47Q9HD33 250 aaKnown RBP30.49■■■□□ 2.47
VEGFA-211ENST00000476772 PARVAQ9NVD7 372 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 MARCH5Q9NX47 278 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 STRIP2Q9ULQ0 834 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 SNX12Q9UMY4 172 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 HYOU1Q9Y4L1 999 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 SAR1BQ9Y6B6 198 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 TCRBV5S1A1TA0A578 114 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 TMEM110-MUSTN1A8MSY1 372 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 GJB6O95452 261 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 ALDH2P05091 517 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 SETSIPP0DME0 302 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 BCAT1P54687 386 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 WDR5P61964 334 aaKnown RBP30.49■■■□□ 2.47
VEGFA-211ENST00000476772 NT5DC3Q86UY8 548 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 C18orf8Q96DM3 657 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 HNRNPABQ99729 332 aaKnown RBP30.49■■■□□ 2.47
VEGFA-211ENST00000476772 TMEM175Q9BSA9 504 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 IL23AQ9NPF7 189 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 ST7Q9NRC1 585 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 CDC23Q9UJX2 597 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 ADAM28Q9UKQ2 775 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 FAN1Q9Y2M0 1017 aa30.49■■■□□ 2.47
VEGFA-211ENST00000476772 SRGAP2O75044 1071 aa30.48■■■□□ 2.47
VEGFA-211ENST00000476772 BST2Q10589 180 aaKnown RBP30.48■■■□□ 2.47
VEGFA-211ENST00000476772 DNAJC24Q6P3W2 148 aa30.48■■■□□ 2.47
VEGFA-211ENST00000476772 TMCO2Q7Z6W1 182 aaPredicted RBP30.48■■■□□ 2.47
VEGFA-211ENST00000476772 SLC35F5Q8WV83 523 aa30.48■■■□□ 2.47
VEGFA-211ENST00000476772 COLEC11Q9BWP8 271 aa30.48■■■□□ 2.47
VEGFA-211ENST00000476772 PRKAG2Q9UGJ0 569 aa30.48■■■□□ 2.47
VEGFA-211ENST00000476772 MYBPHLA2RUH7 354 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 CLDN5O00501 218 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 TRAPPC3O43617 180 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 EFCAB14O75071 495 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 GALTP07902 379 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 PBX3P40426 434 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 GABRB2P47870 512 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 RGS7P49802 495 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 BCAR1P56945 870 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 PMF1Q6P1K2 205 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 XYLT1Q86Y38 959 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 C3orf20Q8ND61 904 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 IPO4Q8TEX9 1081 aaKnown RBP30.47■■■□□ 2.47
VEGFA-211ENST00000476772 ACBD6Q9BR61 282 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 AMFRQ9UKV5 643 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 ALG6Q9Y672 507 aa30.47■■■□□ 2.47
VEGFA-211ENST00000476772 DNA2P51530 1060 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 CDR1P51861 262 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 YWHAHQ04917 246 aaPredicted RBP30.46■■■□□ 2.47
VEGFA-211ENST00000476772 PAQR9Q6ZVX9 377 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 PSMB7Q99436 277 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 NT5C1B-RDH14C9J2C7 533 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 GSCP56915 257 aaPredicted RBP30.46■■■□□ 2.47
VEGFA-211ENST00000476772 TUBB2AQ13885 445 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 FAM117BQ6P1L5 589 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 THEM5Q8N1Q8 247 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 OR10T2Q8NGX3 314 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 FEZF2Q8TBJ5 459 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 MED10Q9BTT4 135 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 TUBB2BQ9BVA1 445 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 B3GNT5Q9BYG0 378 aa30.46■■■□□ 2.47
VEGFA-211ENST00000476772 E5RJQ4 531 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 GOLGA8SH3BPF8 625 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 PIK3R2O00459 728 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 BAIAP3O94812 1187 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 RPS6KA1Q15418 735 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 INTS6LQ5JSJ4 861 aaKnown RBP30.45■■■□□ 2.46
VEGFA-211ENST00000476772 PPP1R15BQ5SWA1 713 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 OTOP2Q7RTS6 562 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 MYCBPAPQ8TBZ2 947 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 BADQ92934 168 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 PCED1BQ96HM7 432 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 OSBPL9Q96SU4 736 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 SLC4A5Q9BY07 1137 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 WDR35Q9P2L0 1181 aa30.45■■■□□ 2.46
VEGFA-211ENST00000476772 PRLRP16471 622 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 RPL7AP62424 266 aaKnown RBP30.44■■■□□ 2.46
VEGFA-211ENST00000476772 ZNF268Q14587 947 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-211ENST00000476772 C16orf59Q7L2K0 433 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 CPNE8Q86YQ8 564 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 C7orf61Q8IZ16 206 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 STK32AQ8WU08 396 aa30.44■■■□□ 2.46
VEGFA-211ENST00000476772 ZNF689Q96CS4 500 aaPredicted RBP30.44■■■□□ 2.46
VEGFA-211ENST00000476772 MCEEQ96PE7 176 aa30.44■■■□□ 2.46
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms