RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 CPXM1Q96SM3 734 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 SELENOSQ9BQE4 189 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 ELOVL4Q9GZR5 314 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 ASB7Q9H672 318 aa16.84■□□□□ 0.29
VARS2-207ENST00000476162 TUT1Q9H6E5 874 aaKnown RBP16.84■□□□□ 0.29
VARS2-207ENST00000476162 TTC4O95801 387 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 PSMA2P25787 234 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 MMP13P45452 471 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 PTPN11Q06124 597 aaPredicted RBP16.83■□□□□ 0.28
VARS2-207ENST00000476162 KYNUQ16719 465 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 TNFAIP8L3Q5GJ75 292 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 IZUMO3Q5VZ72 239 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 C6orf89Q6UWU4 347 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 ILDR2Q71H61 639 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 GLIS1Q8NBF1 620 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 ROPN1BQ9BZX4 212 aaPredicted RBP16.83■□□□□ 0.28
VARS2-207ENST00000476162 ROPN1Q9HAT0 212 aaPredicted RBP16.83■□□□□ 0.28
VARS2-207ENST00000476162 ZNF148Q9UQR1 794 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.83■□□□□ 0.28
VARS2-207ENST00000476162 SH3BP1Q9Y3L3 701 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 PCNTO95613 3336 aa16.83■□□□□ 0.28
VARS2-207ENST00000476162 hCG_1818297A0A087WSY0 165 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CILPO75339 1184 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CHN1P15882 459 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CDKN2BP42772 138 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 SLC8A3P57103 927 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 COPS2P61201 443 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 P3H1Q32P28 736 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 TFDP3Q5H9I0 405 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 SMYD5Q6GMV2 418 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CYB5D1Q6P9G0 228 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 KIAA0319LQ8IZA0 1049 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 ARFGAP1Q8N6T3 406 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 MAB21L3Q8N8X9 362 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 BBOF1Q8ND07 529 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 HAUS1Q96CS2 278 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 TMEM176AQ96HP8 235 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 HPDLQ96IR7 371 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 SYNCQ9H7C4 482 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 DDX56Q9NY93 547 aaKnown RBP16.82■□□□□ 0.28
VARS2-207ENST00000476162 AGAP1Q9UPQ3 857 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CCL15-CCL14A0A0B4J2E2 113 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 STRNO43815 780 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 TSPAN1O60635 241 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 ERBB2P04626 1255 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 ZSCAN5DPP0CG00 497 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CETPP11597 493 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 ATICP31939 592 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 LMNB2Q03252 620 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 TMEM132DQ14C87 1099 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 CCL15Q16663 113 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 FUKQ8N0W3 1084 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 EMC1Q8N766 993 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 SH3GL3Q99963 347 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 VRTNQ9H8Y1 702 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 COL1A2P08123 1366 aa16.82■□□□□ 0.28
VARS2-207ENST00000476162 EME2A4GXA9 379 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 LRCH4O75427 683 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 MICAL2O94851 1124 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 IL1R2P27930 398 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 SMTNL2Q2TAL5 461 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 CCDC38Q502W7 563 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 KCNT1Q5JUK3 1230 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 MARCH8Q5T0T0 291 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 ERMARDQ5T6L9 678 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 MFSD5Q6N075 450 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 HIBCHQ6NVY1 386 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 DRICH1Q6PGQ1 229 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 DPP9Q86TI2 863 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 XYLT1Q86Y38 959 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 KIRREL3Q8IZU9 778 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 CENPTQ96BT3 561 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 XPO6Q96QU8 1125 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 STMN4Q9H169 189 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 ZWILCHQ9H900 591 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 METTL5Q9NRN9 209 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 ETAA1Q9NY74 926 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 NINJ2Q9NZG7 142 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 GLTPD2A6NH11 291 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 SMPD1P17405 629 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 PTPN7P35236 360 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 SLC25A11Q02978 314 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 GRIK4Q16099 956 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 QPCTQ16769 361 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 AP1ARQ63HQ0 302 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 MAP1SQ66K74 1059 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 DPH6Q7L8W6 267 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 ZNF467Q7Z7K2 595 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 BRI3BPQ8WY22 251 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 HEXIM2Q96MH2 286 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 CYP3A43Q9HB55 503 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 SPATS2LQ9NUQ6 558 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 TPX2Q9ULW0 747 aaKnown RBP16.81■□□□□ 0.28
VARS2-207ENST00000476162 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.81■□□□□ 0.28
VARS2-207ENST00000476162 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 PLXNA1Q9UIW2 1896 aa16.81■□□□□ 0.28
VARS2-207ENST00000476162 C3orf70A6NLC5 250 aaPredicted RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms