RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ADAMTS1Q9UHI8 967 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 DSEQ9UL01 958 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 LRFN2Q9ULH4 789 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 BARX2Q9UMQ3 279 aaPredicted RBP7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CEP83Q9Y592 693 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PCDHB12Q9Y5F1 795 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 PCDHA13Q9Y5I0 950 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 FHOD1Q9Y613 1164 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 SPTBN4Q9H254 2564 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 CFAP54Q96N23 3096 aa7.48□□□□□ -1.21
SHQ1-207ENST00000475558 KMT2EQ8IZD2 1858 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 USP34Q70CQ2 3546 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 MYO10Q9HD67 2058 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 KPNA7A9QM74 516 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 C9IYK1 514 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 RNF225M0QZC1 329 aaPredicted RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 NRG2O14511 850 aaPredicted RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 PJA2O43164 708 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 RTN2O75298 545 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 CLSTN1O94985 981 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 LSM8O95777 96 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ITGB3P05106 788 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 H2AFZP0C0S5 128 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 MYBL1P10243 752 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 VDRP11473 427 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 KRT5P13647 590 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 CYP11B1P15538 503 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 POLR2BP30876 1174 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 USP8P40818 1118 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 KIF11P52732 1056 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 VAV2P52735 878 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 VCPP55072 806 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 SLC8A3P57103 927 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ELAVL2Q12926 359 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 PAN2Q504Q3 1202 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 SEZ6Q53EL9 994 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ZBTB41Q5SVQ8 909 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 CCDC122Q5T0U0 273 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 SPOUT1Q5T280 376 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 C9orf57Q5W0N0 161 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 E4F1Q66K89 784 aaPredicted RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 HGSNATQ68CP4 663 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ALKBH5Q6P6C2 394 aaKnown RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 H2AFVQ71UI9 128 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 CDR2LQ86X02 465 aaPredicted RBP7.47□□□□□ -1.21
SHQ1-207ENST00000475558 METTL23Q86XA0 190 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ABI1Q8IZP0 508 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 CEP120Q8N960 986 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 LINC01599Q8WXQ3 324 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 SUSD6Q92537 303 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 TNIP3Q96KP6 325 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 RIPOR3Q96MK2 946 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 NOX5Q96PH1 765 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 MMS19Q96T76 1030 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 COLEC11Q9BWP8 271 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 NT5C1AQ9BXI3 368 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 BCO2Q9BYV7 579 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 XYLT2Q9H1B5 865 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 LHX5Q9H2C1 402 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 TLR9Q9NR96 1032 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 ARHGAP20Q9P2F6 1191 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 PCDHB4Q9Y5E5 795 aa7.47□□□□□ -1.21
SHQ1-207ENST00000475558 A0A0A6YYK5 440 aaPredicted RBP7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ANKRD62A6NC57 917 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ARL5CA6NH57 179 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 SOWAHDA6NJG2 315 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 H0Y858 1186 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 LCE2BO14633 110 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 PER2O15055 1255 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 EPHB6O15197 1021 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 CYP26A1O43174 497 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 NFICP08651 508 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ACO1P21399 889 aaKnown RBP7.46□□□□□ -1.22
SHQ1-207ENST00000475558 AKAP5P24588 427 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 CLCN1P35523 988 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 LILRA4P59901 499 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ARID5AQ03989 594 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TUSC3Q13454 348 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TCEAL1Q15170 157 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 CNGA2Q16280 664 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 DUSP6Q16828 381 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 NOMO2Q5JPE7 1267 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 DNTTIP2Q5QJE6 756 aaKnown RBP7.46□□□□□ -1.22
SHQ1-207ENST00000475558 LIN9Q5TKA1 542 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ACAD10Q6JQN1 1059 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TMEM270Q6UE05 265 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TMEM184AQ6ZMB5 413 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 AGMOQ6ZNB7 445 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF598Q86UK7 904 aaKnown RBP7.46□□□□□ -1.22
SHQ1-207ENST00000475558 EFCAB13Q8IY85 973 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 SYCE1Q8N0S2 351 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 CRYBG2Q8N1P7 616 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 THEM5Q8N1Q8 247 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TMEM35BQ8NCS4 154 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 APPL2Q8NEU8 664 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 TRIM58Q8NG06 486 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 KIF18AQ8NI77 898 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 SLC30A5Q8TAD4 765 aa7.46□□□□□ -1.22
SHQ1-207ENST00000475558 ZNF606Q8WXB4 792 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms