RNA–Protein interactions for RNA: ENST00000475401.1

TM9SF3-204, Transcript of transmembrane 9 superfamily member 3, humanhuman

TSL 2

Gene TM9SF3, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-204ENST00000475401 KLF10Q13118 480 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 INSCQ1MX18 579 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 PLA1AQ53H76 456 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 C3orf38Q5JPI3 329 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 TEDDM1Q5T9Z0 273 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 ARHGAP40Q5TG30 622 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 BEND2Q8NDZ0 799 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 LINC00476Q8WZB0 136 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 LPIN2Q92539 896 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 UNKQ9C0B0 810 aaKnown RBP6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 SCAND2PQ9GZW5 306 aaPredicted RBP6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 CORO2BQ9UQ03 480 aa6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.85□□□□□ -1.31
TM9SF3-204ENST00000475401 ANO9A1A5B4 782 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 FOXN1O15353 648 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 MPPED1O15442 326 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 PROM1O43490 865 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 SEC24CP53992 1094 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 PRKAG1P54619 331 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 RPS16P62249 146 aaKnown RBP6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 DCAF12L1Q5VU92 463 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 KAZNQ674X7 775 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 GAS2L3Q86XJ1 694 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 YAF2Q8IY57 180 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 CCDC146Q8IYE0 955 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 SDR16C5Q8N3Y7 309 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 MYCBPAPQ8TBZ2 947 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 MAML1Q92585 1016 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 MSLNLQ96KJ4 702 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 MESP1Q9BRJ9 268 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 ALG8Q9BVK2 526 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 AMBRA1Q9C0C7 1298 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 PCED1AQ9H1Q7 454 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 SERHLQ9NQF3 203 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 SYBUQ9NX95 663 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 ITGB1BP2Q9UKP3 347 aa6.84□□□□□ -1.31
TM9SF3-204ENST00000475401 WDR33Q9C0J8 1336 aaKnown RBP6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 LOC102723971A0A1B0GUV8 181 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 GRID2IPA4D2P6 1211 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 CCDC151A5D8V7 595 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 TMEM233B4DJY2 109 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 APAF1O14727 1248 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 PMM2O15305 246 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 INMTO95050 263 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 VPS53Q5VIR6 699 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 RGS7BPQ6MZT1 257 aaPredicted RBP6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 TSHZ1Q6ZSZ6 1077 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 SESTD1Q86VW0 696 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 MICU3Q86XE3 530 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 SLC15A3Q8IY34 581 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 ACTRT2Q8TDY3 377 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 FKBP10Q96AY3 582 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 SERTAD3Q9UJW9 196 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 COL4A3Q01955 1670 aa6.83□□□□□ -1.32
TM9SF3-204ENST00000475401 TLR5O60602 858 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 IL18RAPO95256 599 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 CHRM2P08172 466 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 PTPRRQ15256 657 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 SPARTQ8N0X7 666 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 OR56A3Q8NH54 315 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 ATRIPQ8WXE1 791 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 BRIP1Q9BX63 1249 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 KLC4Q9NSK0 619 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 TRMT13Q9NUP7 481 aaKnown RBP6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 COL20A1Q9P218 1284 aa6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 ING1Q9UK53 422 aaPredicted RBP6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 NDRG4Q9ULP0 352 aaKnown RBP6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 EPN1Q9Y6I3 576 aaPredicted RBP6.82□□□□□ -1.32
TM9SF3-204ENST00000475401 A0A087X1B8 175 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 hCG_1984214I3L0E3 225 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 CCP110O43303 1012 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 AKAP8O43823 692 aaKnown RBP6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 NXPH3O95157 252 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 PARP1P09874 1014 aaKnown RBP6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 MPLP40238 635 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 MYO1EQ12965 1108 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 HDAC1Q13547 482 aaPredicted RBP6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 SLC29A2Q14542 456 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 PLAC9Q5JTB6 97 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 LDLRAD3Q86YD5 345 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 FAM109AQ8N4B1 249 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 CCDC33Q8N5R6 958 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 IQCDQ96DY2 449 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 TNIP3Q96KP6 325 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 SORCS2Q96PQ0 1159 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 EHD3Q9NZN3 535 aa6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 MRPS17Q9Y2R5 130 aaKnown RBP6.81□□□□□ -1.32
TM9SF3-204ENST00000475401 PPM1DO15297 605 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 THAP12O43422 761 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 RGS10O43665 173 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 MYL3P08590 195 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 CXCR5P32302 372 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 PIK3CBP42338 1070 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 CARSP49589 748 aaKnown RBP6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 PDE6CP51160 858 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 DGKEP52429 567 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 EIF2B5Q13144 721 aaKnown RBP6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 DAG1Q14118 895 aa6.8□□□□□ -1.32
TM9SF3-204ENST00000475401 TBCCQ15814 346 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms