RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 GALNTL6Q49A17 601 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ACAD10Q6JQN1 1059 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 BARGINQ6ZT62 677 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 KIAA2013Q8IYS2 634 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 CATSPER1Q8NEC5 780 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZFP42Q96MM3 310 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 RUSC1Q9BVN2 902 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 RERGLQ9H628 205 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 MANSC1Q9H8J5 431 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZSCAN32Q9NX65 697 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.4□□□□□ -0.58
VAPB-204ENST00000475243 ITIH6Q6UXX5 1313 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ODC1P11926 461 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ALDH6A1Q02252 535 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 CDC16Q13042 620 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 TC2NQ8N9U0 490 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZIM3Q96PE6 472 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 TRPC1P48995 793 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 SKOR1P84550 965 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZNF177Q13360 481 aaPredicted RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 KLHDC7AQ5VTJ3 777 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ECSITQ9BQ95 431 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 PALMDQ9NP74 551 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ENTPD7Q9NQZ7 604 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 NPM3O75607 178 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 SRP72O76094 671 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 HNRNPCP07910 306 aaKnown RBP eCLIP11.4□□□□□ -0.58
VAPB-204ENST00000475243 TAF6P49848 677 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ANTXR2P58335 489 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 MRPL28Q13084 256 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 DNAJC3Q13217 504 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 LAMB3Q13751 1172 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 KCTD17Q8N5Z5 321 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 CMTM5Q96DZ9 223 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 KIF2CQ99661 725 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 GRID1Q9ULK0 1009 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ZC3H11AO75152 810 aaKnown RBP eCLIP11.4□□□□□ -0.58
VAPB-204ENST00000475243 GYS1P13807 737 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 ANGPT1Q15389 498 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 CALML6Q8TD86 181 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 RPRD1AQ96P16 312 aaPredicted RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 EXOSC4Q9NPD3 245 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 AGPAT3Q9NRZ7 376 aa11.4□□□□□ -0.58
VAPB-204ENST00000475243 RUVBL2Q9Y230 463 aaKnown RBP11.4□□□□□ -0.58
VAPB-204ENST00000475243 LSP1P33241 339 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 CLCN3P51790 818 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 ATG4AQ8WYN0 398 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 KRT35Q92764 455 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 GLT1D1Q96MS3 346 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 WWOXQ9NZC7 414 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 A2ML1A8K2U0 1454 aa11.4□□□□□ -0.59
VAPB-204ENST00000475243 PDS5AQ29RF7 1337 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 SERPINB10P48595 397 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CUL2Q13617 745 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CCDC81Q6ZN84 652 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 TRPM8Q7Z2W7 1104 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CARNMT1Q8N4J0 409 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CNBD2Q96M20 576 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ERP44Q9BS26 406 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 RNF112Q9ULX5 631 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 MYO3AQ8NEV4 1616 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 HEATR9A2RTY3 570 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 RRN3P2A6NIE6 340 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 MSH4O15457 936 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CTDNEP1O95476 244 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ATN1P54259 1190 aaPredicted RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 MAP3K7CLP57077 242 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 OVGP1Q12889 678 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 OLFM3Q96PB7 478 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 SKAP2O75563 359 aaPredicted RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 MLNP12872 115 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 GLRBP48167 497 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 KCNK10P57789 538 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 PTK6Q13882 451 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ICE2Q659A1 982 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 OTOAQ7RTW8 1153 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ANKRD13AQ8IZ07 590 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 C10orf53Q8N6V4 93 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 ACER1Q8TDN7 264 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 THUMPD3Q9BV44 507 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 RASSF10A6NK89 507 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 EVPLLA8MZ36 301 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 FOXP2O15409 715 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 TPST1O60507 370 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CCDC159P0C7I6 412 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 COILP38432 576 aaPredicted RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 FXR2P51116 673 aaKnown RBP eCLIP11.39□□□□□ -0.59
VAPB-204ENST00000475243 ARHGAP15Q53QZ3 475 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 CAPRIN2Q6IMN6 1127 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 CENPPQ6IPU0 288 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 FBXO16Q8IX29 292 aaPredicted RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 CYP4F12Q9HCS2 524 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 SCUBE2Q9NQ36 999 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 TRMT6Q9UJA5 497 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 MRPL42Q9Y6G3 142 aaKnown RBP11.39□□□□□ -0.59
VAPB-204ENST00000475243 CFAP99D6REC4 459 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 SERPINB5P36952 375 aa11.39□□□□□ -0.59
VAPB-204ENST00000475243 EDRF1Q3B7T1 1238 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms