RNA–Protein interactions for RNA: ENST00000474852.1

TPR-205, Transcript of translocated promoter region, nuclear basket protein, humanhuman

TSL 1 (best)

Gene TPR, Length 2,757 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-205ENST00000474852 PCDH9Q9HC56 1237 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 ZNF541Q9H0D2 1346 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 PSMG1O95456 288 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 CDKN2BP42772 138 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 PAPOLAP51003 745 aaKnown RBP17.13■□□□□ 0.33
TPR-205ENST00000474852 ARL4CP56559 192 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 BASP1P80723 227 aaKnown RBP17.13■□□□□ 0.33
TPR-205ENST00000474852 CCDC142Q17RM4 750 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 ALYREFQ86V81 257 aaKnown RBP17.13■□□□□ 0.33
TPR-205ENST00000474852 OR5B17Q8NGF7 314 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 FAM136AQ96C01 138 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 ANKEF1Q9NU02 776 aa17.13■□□□□ 0.33
TPR-205ENST00000474852 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.13■□□□□ 0.338e-6■□□□□ 8.8
TPR-205ENST00000474852 AGO2Q9UKV8 859 aaKnown RBP17.13■□□□□ 0.33
TPR-205ENST00000474852 FAM237BA0A1B0GVD1 139 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 EXTL3O43909 919 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 TMEM63AO94886 807 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 MT-ND3P03897 115 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 FESP07332 822 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 MYL2P10916 166 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 RPS6KA3P51812 740 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
TPR-205ENST00000474852 CCDC62Q6P9F0 684 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 ADGRD1Q6QNK2 874 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 TRIM72Q6ZMU5 477 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 ZNF341Q9BYN7 854 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 KCNK13Q9HB14 408 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 RBAKQ9NYW8 714 aaPredicted RBP17.12■□□□□ 0.33
TPR-205ENST00000474852 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.12■□□□□ 0.33
TPR-205ENST00000474852 SIGLEC16A6NMB1 481 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 CST8O60676 142 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 GARTP22102 1010 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 MMP8P22894 467 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 JAK3P52333 1124 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 SWSAP1Q6NVH7 229 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 DCAKDQ8WVC6 231 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 SERAC1Q96JX3 654 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 POLR3FQ9H1D9 316 aaPredicted RBP17.12■□□□□ 0.33
TPR-205ENST00000474852 ACSS3Q9H6R3 686 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 XPNPEP1Q9NQW7 623 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 IRAK4Q9NWZ3 460 aa17.12■□□□□ 0.33
TPR-205ENST00000474852 FARP1Q9Y4F1 1045 aaPredicted RBP17.12■□□□□ 0.33
TPR-205ENST00000474852 ITGAVP06756 1048 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 KCNA3P22001 575 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 AMPD1P23109 780 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 PTGER2P43116 358 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 POLE2P56282 527 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 DRICH1Q6PGQ1 229 aaPredicted RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 PPIL6Q8IXY8 311 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 FBXO27Q8NI29 283 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 MZB1Q8WU39 189 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 RSAD2Q8WXG1 361 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 VCPIP1Q96JH7 1222 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 FAM161BQ96MY7 647 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 DDX50Q9BQ39 737 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 NMUR2Q9GZQ4 415 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 HAPLN2Q9GZV7 340 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 XPO7Q9UIA9 1087 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 ZNRF3Q9ULT6 936 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 DRG1Q9Y295 367 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 LRCH1Q9Y2L9 728 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 E5RJQ4 531 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 H3BRJ5 948 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 AHCYL1O43865 530 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 MMP10P09238 476 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 PYGBP11216 843 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SKIP12755 728 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 CDK16Q00536 496 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SLC34A1Q06495 639 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 PTK7Q13308 1070 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 MTERF2Q49AM1 385 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 NIPA1Q7RTP0 329 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 IGDCC3Q8IVU1 814 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SAMD3Q8N6K7 520 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 NKD2Q969F2 451 aaPredicted RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 VCXQ9H320 206 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SCOCQ9UIL1 159 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SYNPO2Q9UMS6 1093 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 IKBKGQ9Y6K9 419 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 FCHO1O14526 889 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 CD48P09326 243 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 UBTFL6P0CB48 400 aaPredicted RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 RPL22P35268 128 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 MCL1Q07820 350 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 PSMD6Q15008 389 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 KLHL38Q2WGJ6 581 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 ARHGEF16Q5VV41 709 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 CWF19L1Q69YN2 538 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 FAM71DQ8N9W8 422 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 ZNF398Q8TD17 642 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 TMEM143Q96AN5 459 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 SKA1Q96BD8 255 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 NTPCRQ9BSD7 190 aaKnown RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 MECRQ9BV79 373 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 VPS11Q9H270 941 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 MARCOQ9UEW3 520 aaPredicted RBP17.11■□□□□ 0.33
TPR-205ENST00000474852 PCDHA10Q9Y5I2 948 aa17.11■□□□□ 0.33
TPR-205ENST00000474852 NFASCO94856 1347 aa17.1■□□□□ 0.33
TPR-205ENST00000474852 TM9SF1O15321 606 aa17.1■□□□□ 0.33
TPR-205ENST00000474852 FAM155BO75949 473 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms