RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 INCA1Q0VD86 236 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 LRMPQ12912 555 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ORC1Q13415 861 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 MTMR3Q13615 1198 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 RAB33AQ14088 237 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CTXN3Q4LDR2 81 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ZNF667Q5HYK9 610 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 PPM1JQ5JR12 505 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 KIAA1841Q6NSI8 718 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TRIM65Q6PJ69 517 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TMEM184AQ6ZMB5 413 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SCARA5Q6ZMJ2 495 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SPATA31D4Q6ZUB0 917 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ANKS3Q6ZW76 656 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 DPH6Q7L8W6 267 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 PALB2Q86YC2 1186 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 FAM114A1Q8IWE2 563 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 UBALD2Q8IYN6 164 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ADGRF2Q8IZF7 708 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TTC9BQ8N6N2 239 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 EFHBQ8N7U6 833 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 RNF214Q8ND24 703 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SUSD6Q92537 303 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ELOVL4Q9GZR5 314 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 NIF3L1Q9GZT8 377 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 INTS2Q9H0H0 1204 aaKnown RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 ZCWPW1Q9H0M4 648 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 RBSNQ9H1K0 784 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 DPEP3Q9H4B8 488 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TLE6Q9H808 572 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CRTAC1Q9NQ79 661 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 TMEM30AQ9NV96 361 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 GCNT4Q9P109 453 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 STK39Q9UEW8 545 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CDH22Q9UJ99 828 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 CDV3Q9UKY7 258 aaKnown RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SORCS3Q9UPU3 1222 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 SIK3Q9Y2K2 1263 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 HCFC2Q9Y5Z7 792 aa7.47□□□□□ -1.21
LIMD1-204ENST00000474665 FLNBO75369 2602 aaKnown RBP7.47□□□□□ -1.21
LIMD1-204ENST00000474665 DENND4CQ5VZ89 1909 aa7.46□□□□□ -1.21
LIMD1-204ENST00000474665 OTOGLQ3ZCN5 2332 aa7.46□□□□□ -1.21
LIMD1-204ENST00000474665 ZFYVE26Q68DK2 2539 aa7.46□□□□□ -1.21
LIMD1-204ENST00000474665 A0A1B0GTH6 734 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 SMTNL1A8MU46 457 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RNF225M0QZC1 329 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 N4BP1O75113 896 aaKnown RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 CILPO75339 1184 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 PAPLNO95428 1278 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 CALCAP01258 141 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 PDGFRBP09619 1106 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 FAM163BP0C2L3 166 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 AOC1P19801 751 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 GNL1P36915 607 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 PBX1P40424 430 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 NDST1P52848 882 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 PSMC1P62191 440 aaKnown RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 GPR17Q13304 367 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 CUL2Q13617 745 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 NR1I3Q14994 352 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 EXOC3L4Q17RC7 722 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF280DQ6N043 979 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 FAM171BQ6P995 826 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 SYCE2Q6PIF2 218 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RNF19BQ6ZMZ0 732 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 GBP6Q6ZN66 633 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 PAQR9Q6ZVX9 377 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RRAGAQ7L523 313 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 TMEM86AQ8N2M4 240 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 C12orf76Q8N812 135 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 SUMF1Q8NBK3 374 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ATAD1Q8NBU5 361 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ZNF461Q8TAF7 563 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 SPATA18Q8TC71 538 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 MMS19Q96T76 1030 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ZSWIM1Q9BR11 485 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ACBD6Q9BR61 282 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RTKNQ9BST9 563 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 NAA15Q9BXJ9 866 aaKnown RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RHOBTB2Q9BYZ6 727 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 CYP3A43Q9HB55 503 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 RTN4Q9NQC3 1192 aaKnown RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 DDX43Q9NXZ2 648 aaKnown RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 MAGEC2Q9UBF1 373 aaPredicted RBP7.46□□□□□ -1.22
LIMD1-204ENST00000474665 DSEQ9UL01 958 aa7.46□□□□□ -1.22
LIMD1-204ENST00000474665 ANAPC1Q9H1A4 1944 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 UNC79Q9P2D8 2635 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 MTMR11A4FU01 709 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 OR6C75A6NL08 312 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 BECN2A8MW95 431 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 H7C4K7 107 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 NRG2O14511 850 aaPredicted RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 RFPL2O75678 378 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 C1RP00736 705 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ASGR2P07307 311 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ADH1AP07327 375 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 ATF2P15336 505 aa7.45□□□□□ -1.22
LIMD1-204ENST00000474665 PTPN1P18031 435 aaKnown RBP7.45□□□□□ -1.22
LIMD1-204ENST00000474665 CD58P19256 250 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms