RNA–Protein interactions for RNA: ENST00000474256.1

CDPF1-205, Transcript of cysteine rich DPF motif domain containing 1, humanhuman

TSL 3

Gene CDPF1, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1-205ENST00000474256 IER2Q9BTL4 223 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 SMG9Q9H0W8 520 aaKnown RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 LMAN1LQ9HAT1 526 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 CDH9Q9ULB4 789 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 HPSEQ9Y251 543 aa16.92■□□□□ 0.3
CDPF1-205ENST00000474256 PTPRZ1P23471 2315 aaPredicted RBP16.92■□□□□ 0.3
CDPF1-205ENST00000474256 F5P12259 2224 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 CACNA1IQ9P0X4 2223 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 SLC38A8A6NNN8 435 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 ATP2C2O75185 946 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 FAM163BP0C2L3 166 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 PFKFB1P16118 471 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 WARSP23381 471 aaKnown RBP16.91■□□□□ 0.3
CDPF1-205ENST00000474256 SOX9P48436 509 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 STK4Q13043 487 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 TXNDC8Q6A555 127 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 C4orf50Q6ZRC1 276 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 MAB21L3Q8N8X9 362 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 ZBTB44Q8NCP5 570 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 STKLD1Q8NE28 680 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 GOLGA5Q8TBA6 731 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 TMEM174Q8WUU8 243 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 ZNF516Q92618 1163 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 CRTAC1Q9NQ79 661 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 GTSE1Q9NYZ3 720 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 MAGED2Q9UNF1 606 aaPredicted RBP16.91■□□□□ 0.3
CDPF1-205ENST00000474256 PCDHGA2Q9Y5H1 932 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 GTF3C3Q9Y5Q9 886 aa16.91■□□□□ 0.3
CDPF1-205ENST00000474256 A0A1B0GVL5 298 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 SPECC1L-ADORA2AF8WAN1 911 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 TACC1O75410 805 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 TADA3O75528 432 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 STAU1O95793 577 aaKnown RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 AVPR1AP37288 418 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 MAGEA11P43364 429 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 KPNA1P52294 538 aaPredicted RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 PSMC1P62191 440 aaKnown RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 KRT85P78386 507 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 PSMD2Q13200 908 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 MAPRE1Q15691 268 aaKnown RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 KMT5BQ4FZB7 885 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 TXNDC11Q6PKC3 985 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 MON1AQ86VX9 555 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 RALGPS2Q86X27 583 aaPredicted RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 KIAA0895Q8NCT3 520 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 MRPS31Q92665 395 aaKnown RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 USP13Q92995 863 aaPredicted RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 CHAMP1Q96JM3 812 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 SPATA32Q96LK8 384 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 MMS19Q96T76 1030 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 FAM83CQ9BQN1 747 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 THG1LQ9NWX6 298 aaKnown RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 ZSCAN32Q9NX65 697 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 UXTQ9UBK9 157 aaPredicted RBP16.9■□□□□ 0.3
CDPF1-205ENST00000474256 USP25Q9UHP3 1055 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 CCL26Q9Y258 94 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 CFAP54Q96N23 3096 aa16.9■□□□□ 0.3
CDPF1-205ENST00000474256 FAM186AA6NE01 2351 aa16.89■□□□□ 0.3
CDPF1-205ENST00000474256 FAM237AA0A1B0GTK4 181 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 EXOC3O60645 756 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 KINO60870 393 aaKnown RBP16.89■□□□□ 0.29
CDPF1-205ENST00000474256 MYL1P05976 194 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 PDGFRBP09619 1106 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TDGF1P13385 188 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 CTHP32929 405 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 CLDN10P78369 228 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TNK2Q07912 1038 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 WDR44Q5JSH3 913 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TSSK4Q6SA08 328 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 VSTM1Q6UX27 236 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 SLC9A9Q8IVB4 645 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 SUMF1Q8NBK3 374 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TTC8Q8TAM2 541 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 PLEKHO2Q8TD55 490 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 MYLPFQ96A32 169 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 CEP295NLQ96MC4 621 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 MRPL45Q9BRJ2 306 aaKnown RBP16.89■□□□□ 0.29
CDPF1-205ENST00000474256 XYLT2Q9H1B5 865 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 KIF9Q9HAQ2 790 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TDP1Q9NUW8 608 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 EXOC1Q9NV70 894 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 DMAC2Q9NW81 257 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 MAGEC2Q9UBF1 373 aaPredicted RBP16.89■□□□□ 0.29
CDPF1-205ENST00000474256 NME7Q9Y5B8 376 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 MIA3Q5JRA6 1907 aa16.89■□□□□ 0.29
CDPF1-205ENST00000474256 TCHHQ07283 1943 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 LILRB5O75023 590 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 ATICP31939 592 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 GNL1P36915 607 aaPredicted RBP16.88■□□□□ 0.29
CDPF1-205ENST00000474256 MYL6P60660 151 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 GAS6Q14393 721 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 ZNF268Q14587 947 aaPredicted RBP16.88■□□□□ 0.29
CDPF1-205ENST00000474256 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 SCN4BQ8IWT1 228 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 RIN3Q8TB24 985 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 MYCBPAPQ8TBZ2 947 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 PARD3BQ8TEW8 1205 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 ATRIPQ8WXE1 791 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 PCED1BQ96HM7 432 aa16.88■□□□□ 0.29
CDPF1-205ENST00000474256 SPATA17Q96L03 361 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms