RNA–Protein interactions for RNA: ENST00000474048.1

PRPF38A-202, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 1 (best)

Gene PRPF38A, Length 1,059 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-202ENST00000474048 A0A0A6YYK5 440 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 USP27XA6NNY8 438 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 PJA2O43164 708 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 B4GALT3O60512 393 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 AP1G2O75843 785 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 CYP1A1P04798 512 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 TNNT1P13805 278 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 CASQ1P31415 396 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 MAGEA10P43363 369 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 GLUD2P49448 558 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 TAP1Q03518 808 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 SMARCB1Q12824 385 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 PSMD5Q16401 504 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 SLC39A12Q504Y0 691 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF569Q5MCW4 686 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 DENND1BQ6P3S1 775 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 DCUN1D2Q6PH85 259 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 MMS22LQ6ZRQ5 1243 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF662Q6ZS27 426 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 C16orf59Q7L2K0 433 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 LIMS2Q7Z4I7 341 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 FAM35AQ86V20 835 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 OSTM1Q86WC4 334 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 SIX6OS1Q8N1H7 587 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 ANKRD52Q8NB46 1076 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 UBA3Q8TBC4 463 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 MYCBPAPQ8TBZ2 947 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 RIN2Q8WYP3 895 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 TFAP2BQ92481 460 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 MYLPFQ96A32 169 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 C18orf8Q96DM3 657 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 HNRNPABQ99729 332 aaKnown RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 SYT11Q9BT88 431 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 SELENOOQ9BVL4 669 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 THAP2Q9H0W7 228 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 ISCUQ9H1K1 167 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 LRRC4Q9HBW1 653 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 KRT82Q9NSB4 513 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 PARVAQ9NVD7 372 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 MARCH5Q9NX47 278 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 ABI2Q9NYB9 513 aaPredicted RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 UVRAGQ9P2Y5 699 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 HCSTQ9UBK5 93 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 GTF3C4Q9UKN8 822 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 PCDHB5Q9Y5E4 795 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 BRCA2P51587 3418 aa10.86□□□□□ -0.67
PRPF38A-202ENST00000474048 BTNL10A8MVZ5 291 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 F8W810 466 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 C2CD2LO14523 706 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF263O14978 683 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 BUB1O43683 1085 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 OAZ2O95190 189 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 SOD2P04179 222 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 UNGP13051 313 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 NPR3P17342 541 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 FGFR3P22607 806 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 EPHB4P54760 987 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 HTRA4P83105 476 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PLCB3Q01970 1234 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PDCLQ13371 301 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 SMC1AQ14683 1233 aaKnown RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 OR6B2Q6IFH4 312 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PHF13Q86YI8 300 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 REXO1L1PQ8IX06 675 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 MCOLN2Q8IZK6 566 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 SLC39A11Q8N1S5 342 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 KIF18AQ8NI77 898 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 ZNF564Q8TBZ8 553 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 C2orf15Q8WU43 125 aaKnown RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 VWCEQ96DN2 955 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 SAMD11Q96NU1 681 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PCDHB18PQ96TA0 734 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 HERC2P3Q9BVR0 1158 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 NUP85Q9BW27 656 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PACSIN1Q9BY11 444 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 GPR62Q9BZJ7 368 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 DMAP1Q9NPF5 467 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 MRPL17Q9NRX2 175 aaKnown RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 TAS2R14Q9NYV8 317 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 CXXC1Q9P0U4 656 aaPredicted RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 MSRAQ9UJ68 235 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 REXO2Q9Y3B8 237 aaKnown RBP10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 KIAA1671Q9BY89 1806 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 PTPRSQ13332 1948 aa10.85□□□□□ -0.67
PRPF38A-202ENST00000474048 NCANO14594 1321 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 CTAGE9A4FU28 777 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 GOLGA8SH3BPF8 625 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 XPO1O14980 1071 aaKnown RBP10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 TRIM66O15016 1216 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 ATMINO43313 823 aaPredicted RBP10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 HCRTO43612 131 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 ATP2C2O75185 946 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 FGF18O76093 207 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 MOCS3O95396 460 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 MMP8P22894 467 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 DNAJB2P25686 324 aa10.84□□□□□ -0.67
PRPF38A-202ENST00000474048 ELF1P32519 619 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms