RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 HEMGNQ9BXL5 484 aa19.01■□□□□ 0.63
VARS2-206ENST00000473916 HMX1Q9NP08 348 aaPredicted RBP19.01■□□□□ 0.63
VARS2-206ENST00000473916 GOLGA6L10A0A0M3HER8 536 aa19■□□□□ 0.63
VARS2-206ENST00000473916 CASTOR2A6NHX0 329 aa19■□□□□ 0.63
VARS2-206ENST00000473916 SIGLEC16A6NMB1 481 aa19■□□□□ 0.63
VARS2-206ENST00000473916 ATP8B1O43520 1251 aa19■□□□□ 0.63
VARS2-206ENST00000473916 PSTPIP1O43586 416 aa19■□□□□ 0.63
VARS2-206ENST00000473916 CABYRO75952 493 aa19■□□□□ 0.63
VARS2-206ENST00000473916 GNL1P36915 607 aaPredicted RBP19■□□□□ 0.63
VARS2-206ENST00000473916 PNPLA4P41247 253 aa19■□□□□ 0.63
VARS2-206ENST00000473916 GABRB2P47870 512 aa19■□□□□ 0.63
VARS2-206ENST00000473916 CLCNKBP51801 687 aa19■□□□□ 0.63
VARS2-206ENST00000473916 MBTPS1Q14703 1052 aa19■□□□□ 0.63
VARS2-206ENST00000473916 SV2CQ496J9 727 aa19■□□□□ 0.63
VARS2-206ENST00000473916 MAP9Q49MG5 647 aa19■□□□□ 0.63
VARS2-206ENST00000473916 TRNP1Q6NT89 227 aa19■□□□□ 0.63
VARS2-206ENST00000473916 TRAF7Q6Q0C0 670 aa19■□□□□ 0.63
VARS2-206ENST00000473916 SND1Q7KZF4 910 aaKnown RBP eCLIP19■□□□□ 0.63
VARS2-206ENST00000473916 ADGRF2Q8IZF7 708 aa19■□□□□ 0.63
VARS2-206ENST00000473916 APPL2Q8NEU8 664 aa19■□□□□ 0.63
VARS2-206ENST00000473916 TSPYL2Q9H2G4 693 aaPredicted RBP19■□□□□ 0.63
VARS2-206ENST00000473916 FAM124BQ9H5Z6 455 aaPredicted RBP19■□□□□ 0.63
VARS2-206ENST00000473916 KIAA1257Q9ULG3 409 aa19■□□□□ 0.63
VARS2-206ENST00000473916 BHMG1C9JSJ3 638 aaPredicted RBP19■□□□□ 0.63
VARS2-206ENST00000473916 PHF2O75151 1096 aa19■□□□□ 0.63
VARS2-206ENST00000473916 ATP2C2O75185 946 aa19■□□□□ 0.63
VARS2-206ENST00000473916 GRAP2O75791 330 aa19■□□□□ 0.63
VARS2-206ENST00000473916 CKBP12277 381 aa19■□□□□ 0.63
VARS2-206ENST00000473916 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
VARS2-206ENST00000473916 ADORA2BP29275 332 aa19■□□□□ 0.63
VARS2-206ENST00000473916 ECHS1P30084 290 aa19■□□□□ 0.63
VARS2-206ENST00000473916 RAB6CQ53S08 254 aa19■□□□□ 0.63
VARS2-206ENST00000473916 FAM183BPQ6ZVS7 135 aa19■□□□□ 0.63
VARS2-206ENST00000473916 CCDC50Q8IVM0 306 aa19■□□□□ 0.63
VARS2-206ENST00000473916 SLAIN1Q8ND83 568 aa19■□□□□ 0.63
VARS2-206ENST00000473916 ATG4AQ8WYN0 398 aa19■□□□□ 0.63
VARS2-206ENST00000473916 MAGOHBQ96A72 148 aaKnown RBP19■□□□□ 0.63
VARS2-206ENST00000473916 RNF25Q96BH1 459 aaPredicted RBP19■□□□□ 0.63
VARS2-206ENST00000473916 MCRS1Q96EZ8 462 aa19■□□□□ 0.63
VARS2-206ENST00000473916 TRIM31Q9BZY9 425 aa19■□□□□ 0.63
VARS2-206ENST00000473916 RAB6CQ9H0N0 254 aa19■□□□□ 0.63
VARS2-206ENST00000473916 NEUROG2Q9H2A3 272 aa19■□□□□ 0.63
VARS2-206ENST00000473916 MOXD2PA6NHM9 499 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 FSCN2O14926 492 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 GNRH1P01148 92 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 POMCP01189 267 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 THP07101 528 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 RALAP11233 206 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 PSMA2P25787 234 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 TKTP29401 623 aaKnown RBP18.99■□□□□ 0.63
VARS2-206ENST00000473916 KCNJ1P48048 391 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 DR1Q01658 176 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 PDE4CQ08493 712 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 FAM26DQ5JW98 314 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 FAM102AQ5T9C2 384 aaPredicted RBP18.99■□□□□ 0.63
VARS2-206ENST00000473916 WSCD1Q658N2 575 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 UNC93AQ86WB7 457 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 KATNAL2Q8IYT4 538 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 C1orf54Q8WWF1 131 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 TSPAN18Q96SJ8 248 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 FAM118BQ9BPY3 351 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 DPH5Q9H2P9 285 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 SNX25Q9H3E2 840 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 R3HDM2Q9Y2K5 976 aaKnown RBP18.99■□□□□ 0.63
VARS2-206ENST00000473916 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.99■□□□□ 0.63
VARS2-206ENST00000473916 TRIM17Q9Y577 477 aa18.99■□□□□ 0.63
VARS2-206ENST00000473916 CYB561D2O14569 222 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 DAPK3O43293 454 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 HUS1O60921 280 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 GSCP56915 257 aaPredicted RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 ADCY2Q08462 1091 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 ZNF268Q14587 947 aaPredicted RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 TAF5Q15542 800 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 MRPL10Q7Z7H8 261 aaKnown RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 KRT222Q8N1A0 295 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 STARD7Q9NQZ5 370 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 A0A0U1RQG5 324 aaPredicted RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 H3BQF6 201 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 PTGIRP43119 386 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 EPHB4P54760 987 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 TAP1Q03518 808 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 SMTNL2Q2TAL5 461 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 SH3PXD2AQ5TCZ1 1133 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 OR6B2Q6IFH4 312 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 NIPA2Q8N8Q9 360 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 TSEN2Q8NCE0 465 aaKnown RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 CCDC26Q8TAB7 109 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 B3GNT5Q9BYG0 378 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 CHST7Q9NS84 486 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 HPCAL4Q9UM19 191 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 INPP5FQ9Y2H2 1132 aa18.98■□□□□ 0.63
VARS2-206ENST00000473916 TIMM13Q9Y5L4 95 aaPredicted RBP18.98■□□□□ 0.63
VARS2-206ENST00000473916 A0A0U1RQF3 1178 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 PODXLO00592 558 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 LRCH4O75427 683 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 RPLP2P05387 115 aaKnown RBP18.97■□□□□ 0.63
VARS2-206ENST00000473916 IL1R2P27930 398 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 SNX1Q13596 522 aa18.97■□□□□ 0.63
VARS2-206ENST00000473916 PIGHQ14442 188 aaPredicted RBP18.97■□□□□ 0.63
VARS2-206ENST00000473916 PAN2Q504Q3 1202 aaKnown RBP18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms