RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 TRAPPC3O43617 180 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 CXCL10P02778 98 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 FGFR1P11362 822 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 KRT3P12035 628 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 ACADSBP45954 432 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 ELF2Q15723 593 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 C2CD6Q53TS8 623 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 UBA3Q8TBC4 463 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 MCEEQ96PE7 176 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 CPXM1Q96SM3 734 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 MRPL9Q9BYD2 267 aaKnown RBP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 C11orf49Q9H6J7 331 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 ARGLU1Q9NWB6 273 aaPredicted RBP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 CDH9Q9ULB4 789 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 TTC7AQ9ULT0 858 aaPredicted RBP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 PCDHA3Q9Y5H8 950 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 V9GYY5 206 aaPredicted RBP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 TMEM191CA6NGB0 347 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 DDX3YO15523 660 aaKnown RBP15.43■□□□□ 0.06
HIF3A-206ENST00000472815 MCM3P25205 808 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 LMO2P25791 158 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 RWDD2BP57060 319 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 PTPROQ16827 1216 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 CYP4A22Q5TCH4 519 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 NECAB2Q7Z6G3 386 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 THEM5Q8N1Q8 247 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 LRRN4CLQ8ND94 238 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 SPATA4Q8NEY3 305 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 FNIP1Q8TF40 1166 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 BTBD6Q96KE9 485 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 ATP11BQ9Y2G3 1177 aa15.43■□□□□ 0.06
HIF3A-206ENST00000472815 GOLGA6L10A0A0M3HER8 536 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 TMEM189-UBE2V1I3L0A0 370 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 M0QZQ0 153 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PSTPIP1O43586 416 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CYP11A1P05108 521 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CLTBP09497 229 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PTPN1P18031 435 aaKnown RBP15.42■□□□□ 0.06
HIF3A-206ENST00000472815 EN2P19622 333 aaPredicted RBP15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CETN2P41208 172 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 DSC1Q08554 894 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PPP2R5EQ16537 467 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PKDCCQ504Y2 493 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CLLU1OSQ5K130 101 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PHLDB2Q86SQ0 1253 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 XYLT1Q86Y38 959 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 RASGEF1CQ8N431 466 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CD101Q93033 1021 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PAWRQ96IZ0 340 aaKnown RBP15.42■□□□□ 0.06
HIF3A-206ENST00000472815 HNRNPABQ99729 332 aaKnown RBP15.42■□□□□ 0.06
HIF3A-206ENST00000472815 PPP1R12CQ9BZL4 782 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 DPEP3Q9H4B8 488 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 TMEM39AQ9NV64 488 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 CYTH4Q9UIA0 394 aa15.42■□□□□ 0.06
HIF3A-206ENST00000472815 TCRBV5S1A1TA0A578 114 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 GOLGA8SH3BPF8 625 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 CCDC188H7C350 402 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 TYMPP19971 482 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 ADORA2BP29275 332 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 CCL23P55773 120 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 ACAP1Q15027 740 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 MAPRE1Q15691 268 aaKnown RBP15.41■□□□□ 0.06
HIF3A-206ENST00000472815 TIGD5Q53EQ6 642 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 RHOT1Q8IXI2 618 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 MMGT1Q8N4V1 131 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 NIPA2Q8N8Q9 360 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 C3orf58Q8NDZ4 430 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 SLC2A14Q8TDB8 520 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 DIS3LQ8TF46 1054 aaKnown RBP15.41■□□□□ 0.06
HIF3A-206ENST00000472815 SLC35F5Q8WV83 523 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 SUSD3Q96L08 255 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 HSFY1Q96LI6 401 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 RNPC3Q96LT9 517 aaKnown RBP15.41■□□□□ 0.06
HIF3A-206ENST00000472815 SYT15Q9BQS2 421 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 TBC1D13Q9NVG8 400 aa15.41■□□□□ 0.06
HIF3A-206ENST00000472815 MKI67P46013 3256 aaKnown RBP15.41■□□□□ 0.06
HIF3A-206ENST00000472815 TTC3P53804 2025 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 SCN5AQ14524 2016 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 PDE2AO00408 941 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 ERBB2P04626 1255 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 CCDC130P13994 396 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 PLCB3Q01970 1234 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 IKBKEQ14164 716 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 GLE1Q53GS7 698 aaKnown RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 ODF2Q5BJF6 829 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 FAM102AQ5T9C2 384 aaPredicted RBP15.4■□□□□ 0.06
HIF3A-206ENST00000472815 OR6B2Q6IFH4 312 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 CNKSR3Q6P9H4 555 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 TMEM110Q86TL2 294 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 OSTM1Q86WC4 334 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 TTC30AQ86WT1 665 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 NPAS4Q8IUM7 802 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 MCRS1Q96EZ8 462 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 SCLYQ96I15 445 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 MS4A14Q96JA4 679 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 NCAPGQ9BPX3 1015 aa15.4■□□□□ 0.06
HIF3A-206ENST00000472815 ACBD6Q9BR61 282 aa15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms