RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 KCNN1Q92952 543 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 SLC22A12Q96S37 553 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 SEPT5Q99719 369 aaPredicted RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 HSFX1Q9UBD0 423 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 CPSF3Q9UKF6 684 aaKnown RBP10.09□□□□□ -0.79
VCL-204ENST00000472585 TBX20Q9UMR3 447 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 INVSQ9Y283 1065 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 GON4LQ3T8J9 2241 aa10.09□□□□□ -0.79
VCL-204ENST00000472585 MAST4O15021 2626 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 A0A0B4J269 797 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 OGTO15294 1046 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 TADA3O75528 432 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 PIGRP01833 764 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 PLA2G4BP0C869 781 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 HAPLN1P10915 354 aaPredicted RBP10.08□□□□□ -0.8
VCL-204ENST00000472585 PRPHP41219 470 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 DHPSP49366 369 aaPredicted RBP10.08□□□□□ -0.8
VCL-204ENST00000472585 IRX4P78413 519 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 PPP2R3AQ06190 1150 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 E2F4Q16254 413 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 TMEM119Q4V9L6 283 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 WSCD1Q658N2 575 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 ARMCX5Q6P1M9 558 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 ITIH5Q86UX2 942 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 PROSER1Q86XN7 944 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 ZSWIM2Q8NEG5 633 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 FAM84AQ96KN4 292 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 CYP2S1Q96SQ9 504 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 KIF2CQ99661 725 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 LLPHQ9BRT6 129 aaKnown RBP10.08□□□□□ -0.8
VCL-204ENST00000472585 TIPINQ9BVW5 301 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 NUSAP1Q9BXS6 441 aaKnown RBP10.08□□□□□ -0.8
VCL-204ENST00000472585 EBF1Q9UH73 591 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 LIMCH1Q9UPQ0 1083 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 GPSM3Q9Y4H4 160 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 FREM2Q5SZK8 3169 aa10.08□□□□□ -0.8
VCL-204ENST00000472585 LOC400499M0QZD8 3231 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 SPAARA0A1B0GVQ0 90 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 PATE3B3GLJ2 98 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 CYB561D2O14569 222 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 HCRTO43612 131 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 ODC1P11926 461 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 DRD1P21728 446 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 GJA4P35212 333 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 MATR3P43243 847 aaKnown RBP eCLIP10.07□□□□□ -0.8
VCL-204ENST00000472585 MAPK8P45983 427 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 TUFMP49411 452 aaKnown RBP10.07□□□□□ -0.8
VCL-204ENST00000472585 ACOT2P49753 483 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 SMTNP53814 917 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 ZXDBP98169 803 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 PSMD2Q13200 908 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 CAMK2BQ13554 666 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 COL28A1Q2UY09 1125 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 MGAT5BQ3V5L5 792 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 FBXO43Q4G163 708 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 CRELD2Q6UXH1 353 aaPredicted RBP10.07□□□□□ -0.8
VCL-204ENST00000472585 DTHD1Q6ZMT9 781 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 SYT13Q7L8C5 426 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 RPLP0P6Q8NHW5 317 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 PIGKQ92643 395 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 ACDQ96AP0 544 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 GCNAQ96QF7 691 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 REEP2Q9BRK0 252 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 LINC00597Q9H2U6 94 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 RPF1Q9H9Y2 349 aaKnown RBP10.07□□□□□ -0.8
VCL-204ENST00000472585 BLOC1S4Q9NUP1 217 aa10.07□□□□□ -0.8
VCL-204ENST00000472585 HNRNPLP14866 589 aaKnown RBP eCLIP10.06□□□□□ -0.8
VCL-204ENST00000472585 BCKDHBP21953 392 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 CDC25CP30307 473 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 LIG4P49917 911 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 ZNF131P52739 623 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 ATXN3P54252 364 aaPredicted RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 ATP2C1P98194 919 aaPredicted RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 GRIN1Q05586 938 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 MESP2Q0VG99 397 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 DMC1Q14565 340 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 TAF12Q16514 161 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 DDR2Q16832 855 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 GAB4Q2WGN9 574 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 ZC2HC1CQ53FD0 456 aaPredicted RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 TRIM61Q5EBN2 209 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 PMS2CLQ68D20 193 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 CC2D1AQ6P1N0 951 aaPredicted RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 MON1AQ86VX9 555 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 SFTPA1Q8IWL2 248 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 EFCAB13Q8IY85 973 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 HDDC3Q8N4P3 179 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 CHCHD4Q8N4Q1 142 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 TSTD1Q8NFU3 115 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 CXorf38Q8TB03 319 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 BICD1Q96G01 975 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 PKMYT1Q99640 499 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 P2RY13Q9BPV8 354 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 PYM1Q9BRP8 204 aaKnown RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 PI4K2AQ9BTU6 479 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 MSTO1Q9BUK6 570 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 ECT2Q9H8V3 914 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 TDP1Q9NUW8 608 aa10.06□□□□□ -0.8
VCL-204ENST00000472585 ABI2Q9NYB9 513 aaPredicted RBP10.06□□□□□ -0.8
VCL-204ENST00000472585 NOL7Q9UMY1 257 aaKnown RBP10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms