RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.13
UBXN11-213ENST00000472155 PEBP4Q96S96 227 aa15.83■□□□□ 0.13
UBXN11-213ENST00000472155 RBM15Q96T37 977 aaKnown RBP eCLIP15.83■□□□□ 0.13
UBXN11-213ENST00000472155 TMEM109Q9BVC6 243 aa15.83■□□□□ 0.13
UBXN11-213ENST00000472155 FAM129AQ9BZQ8 928 aa15.83■□□□□ 0.13
UBXN11-213ENST00000472155 ZNF518BQ9C0D4 1074 aa15.83■□□□□ 0.13
UBXN11-213ENST00000472155 SYNCQ9H7C4 482 aa15.83■□□□□ 0.13
UBXN11-213ENST00000472155 SIGLEC16A6NMB1 481 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 ASAP2O43150 1006 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 IL18RAPO95256 599 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 AGTP01019 485 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 GPD2P43304 727 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 RGS7P49802 495 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 YWHAEP62258 255 aaKnown RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 MMRN1Q13201 1228 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 PIGHQ14442 188 aaPredicted RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 HIC1Q14526 733 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 OASLQ15646 514 aaKnown RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 GRIK4Q16099 956 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 C15orf59Q2T9L4 293 aaPredicted RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 SYCP2LQ5T4T6 812 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 VSTM1Q6UX27 236 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 PACS2Q86VP3 889 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 MICALL1Q8N3F8 863 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 ALLCQ8N6M5 410 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 ARHGEF2Q92974 986 aaKnown RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 MRRFQ96E11 262 aaKnown RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 ZNF317Q96PQ6 595 aaPredicted RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 EIF2AQ9BY44 585 aaKnown RBP15.83■□□□□ 0.12
UBXN11-213ENST00000472155 CEP83Q9Y592 693 aa15.83■□□□□ 0.12
UBXN11-213ENST00000472155 TJP3O95049 919 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 MCF2P10911 925 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 MAGEA9P43362 315 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 TMEM132DQ14C87 1099 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 RNF187Q5TA31 235 aaPredicted RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 EXOC8Q8IYI6 725 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 LRRC34Q8IZ02 419 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 CCDC89Q8N998 374 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 SHCBP1Q8NEM2 672 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 NPLOC4Q8TAT6 608 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 ACTL9Q8TC94 416 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 ZC3H15Q8WU90 426 aaKnown RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 HSPH1Q92598 858 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 SEC16BQ96JE7 1060 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 PTPN18Q99952 460 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 NFKBIZQ9BYH8 718 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 WDR3Q9UNX4 943 aaKnown RBP eCLIP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 CST8O60676 142 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 OTUD4Q01804 1114 aaKnown RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 CNGA2Q16280 664 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 FAM187BQ17R55 369 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 ANKRD22Q5VYY1 191 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 C6orf89Q6UWU4 347 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 NPNTQ6UXI9 565 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 SYDE1Q6ZW31 735 aaPredicted RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 GPR142Q7Z601 462 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 C18orf25Q96B23 403 aaPredicted RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 KIF12Q96FN5 646 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 SAYSD1Q9NPB0 183 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 INTS9Q9NV88 658 aaKnown RBP15.82■□□□□ 0.12
UBXN11-213ENST00000472155 DPP3Q9NY33 737 aa15.82■□□□□ 0.12
UBXN11-213ENST00000472155 SGK1O00141 431 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 PFKMP08237 780 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MIPP30301 263 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 VCPP55072 806 aaKnown RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 CDO1Q16878 200 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 DPP9Q86TI2 863 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 NIPA2Q8N8Q9 360 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 ANKRD42Q8N9B4 389 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 LHX5Q9H2C1 402 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 FAM49BQ9NUQ9 324 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 SNTG2Q9NY99 539 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 TUBGCP4Q9UGJ1 667 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 E5RJQ4 531 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 ATP2C2O75185 946 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MAP3K6O95382 1288 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 NPTXRO95502 500 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 HOXA11P31270 313 aaPredicted RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MAGEA4P43358 317 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 FAM102AQ5T9C2 384 aaPredicted RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 LRRC38Q5VT99 294 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MFSD5Q6N075 450 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 CPLX4Q7Z7G2 160 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 TADA2BQ86TJ2 420 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 CHMP6Q96FZ7 201 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MRPL45Q9BRJ2 306 aaKnown RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 OSBPL7Q9BZF2 842 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 CNOT10Q9H9A5 744 aaKnown RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 HOMER3Q9NSC5 361 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 NAALADL1Q9UQQ1 740 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 TRIP12Q14669 1992 aaPredicted RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 A0A1B0GUA9 196 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 TCRBV7S3A2A0A539 114 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 TMEM120BA0PK00 339 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 DNALI1O14645 258 aaPredicted RBP15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MMP3P08254 477 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 KDELR1P24390 212 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 GCAP28676 217 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 FBXW10Q5XX13 1052 aa15.81■□□□□ 0.12
UBXN11-213ENST00000472155 MAML3Q96JK9 1138 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms