RNA–Protein interactions for RNA: ENST00000471987.1

CD46-213, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-213ENST00000471987 ZNF66Q6ZN08 573 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 LRRC71Q8N4P6 559 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 RP9Q8TA86 221 aaKnown RBP5.97□□□□□ -1.45
CD46-213ENST00000471987 MAP3K14Q99558 947 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 GLOD4Q9HC38 313 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 SSX2IPQ9Y2D8 614 aa5.97□□□□□ -1.45
CD46-213ENST00000471987 TISP43B9A030 160 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 PPP6CO00743 305 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 FESP07332 822 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 GRPP07492 148 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 ITGB6P18564 788 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 VIPR2P41587 438 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 PDE1AP54750 535 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 E2F2Q14209 437 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 MORN5Q5VZ52 161 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 Q8N9P0 234 aaPredicted RBP5.96□□□□□ -1.46
CD46-213ENST00000471987 ATG4AQ8WYN0 398 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 RPL36ALQ969Q0 106 aaKnown RBP5.96□□□□□ -1.46
CD46-213ENST00000471987 BHMT2Q9H2M3 363 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 PCDHA6Q9UN73 950 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 SHOC2Q9UQ13 582 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 BTBD3Q9Y2F9 522 aa5.96□□□□□ -1.46
CD46-213ENST00000471987 MYO1FO00160 1098 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 NPSP0C0P6 89 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 NHLRC4P0CG21 123 aaPredicted RBP5.95□□□□□ -1.46
CD46-213ENST00000471987 CYP2D6P10635 497 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 ENGP17813 658 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 MPGP29372 298 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 PTGER1P34995 402 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 NEK2P51955 445 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 HOXA4Q00056 320 aaPredicted RBP5.95□□□□□ -1.46
CD46-213ENST00000471987 SP2Q02086 613 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 GTF2H3Q13889 308 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 RGS7BPQ6MZT1 257 aaPredicted RBP5.95□□□□□ -1.46
CD46-213ENST00000471987 C11orf87Q6NUJ2 197 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 PARS2Q7L3T8 475 aaKnown RBP5.95□□□□□ -1.46
CD46-213ENST00000471987 YTHDF3Q7Z739 585 aaKnown RBP5.95□□□□□ -1.46
CD46-213ENST00000471987 GLG1Q92896 1179 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 HPS3Q969F9 1004 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 FSD1LQ9BXM9 530 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 CNNM1Q9NRU3 951 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 ADAMTS5Q9UNA0 930 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 ANKRD6Q9Y2G4 727 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 STXBP5LQ9Y2K9 1186 aa5.95□□□□□ -1.46
CD46-213ENST00000471987 A1L4Q6 167 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 PRRT4C9JH25 899 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 TUBB4AP04350 444 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 CYP4F2P78329 520 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 ATAT1Q5SQI0 421 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 NAPRTQ6XQN6 538 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 GRAMD1CQ8IYS0 662 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 ZNF366Q8N895 744 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 C1GALT1C1Q96EU7 318 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 CGRRF1Q99675 332 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 XPR1Q9UBH6 696 aa5.94□□□□□ -1.46
CD46-213ENST00000471987 NDRG4Q9ULP0 352 aaKnown RBP5.94□□□□□ -1.46
CD46-213ENST00000471987 PROB1E7EW31 1015 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 TP73O15350 636 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 ALDH2P05091 517 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 PF4V1P10720 104 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 CYP2C9P11712 490 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 LRPAP1P30533 357 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 TPTEP56180 551 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 KLF9Q13886 244 aaPredicted RBP5.93□□□□□ -1.46
CD46-213ENST00000471987 TBC1D25Q3MII6 688 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 CEP78Q5JTW2 689 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 SLC9A4Q6AI14 798 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.93□□□□□ -1.46
CD46-213ENST00000471987 SLC18B1Q6NT16 456 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 XAGE5Q8WWM1 108 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 R3HDM4Q96D70 268 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 BRINP2Q9C0B6 783 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 AASDHPPTQ9NRN7 309 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 IP6K2Q9UHH9 426 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 CCNL1Q9UK58 526 aaPredicted RBP5.93□□□□□ -1.46
CD46-213ENST00000471987 MED16Q9Y2X0 877 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 TMX2Q9Y320 296 aa5.93□□□□□ -1.46
CD46-213ENST00000471987 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.93□□□□□ -1.46
CD46-213ENST00000471987 KRTAP29-1A8MX34 341 aaPredicted RBP5.92□□□□□ -1.46
CD46-213ENST00000471987 MYO1CO00159 1063 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 ERC2O15083 957 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 OFD1O75665 1012 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 TJP3O95049 919 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 THP07101 528 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 XRCC6P12956 609 aaKnown RBP eCLIP5.92□□□□□ -1.46
CD46-213ENST00000471987 ETFDHQ16134 617 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 PTPROQ16827 1216 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 MTHFD1LQ6UB35 978 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 TRIM72Q6ZMU5 477 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 Q6ZWC4 215 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 CELF5Q8N6W0 485 aaKnown RBP5.92□□□□□ -1.46
CD46-213ENST00000471987 PNLDC1Q8NA58 520 aaKnown RBP5.92□□□□□ -1.46
CD46-213ENST00000471987 CYP2W1Q8TAV3 490 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 DENND1AQ8TEH3 1009 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 FCRL4Q96PJ5 515 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 QTRT1Q9BXR0 403 aaKnown RBP5.92□□□□□ -1.46
CD46-213ENST00000471987 ARMT1Q9H993 441 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 CPA4Q9UI42 421 aa5.92□□□□□ -1.46
CD46-213ENST00000471987 DLDP09622 509 aaKnown RBP5.91□□□□□ -1.46
CD46-213ENST00000471987 CT47B1P0C2W7 299 aaPredicted RBP5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms