RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 LILRB5O75023 590 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 DLATP10515 647 aaKnown RBP24.16■■□□□ 1.46
C9orf3-213ENST00000471978 CCR3P51677 355 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 TNK2Q07912 1038 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 EHHADHQ08426 723 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 CFAP221Q4G0U5 840 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 RESP18Q5W5W9 173 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 TXNDC8Q6A555 127 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 ATL3Q6DD88 541 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 TXNDC11Q6PKC3 985 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 DCLK2Q8N568 766 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 MRPS31Q92665 395 aaKnown RBP24.16■■□□□ 1.46
C9orf3-213ENST00000471978 UXTQ9UBK9 157 aaPredicted RBP24.16■■□□□ 1.46
C9orf3-213ENST00000471978 CFAP45Q9UL16 551 aa24.16■■□□□ 1.46
C9orf3-213ENST00000471978 TDGF1P13385 188 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 TNNI1P19237 187 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 AFMP43652 599 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 ID4P47928 161 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 CYP2J2P51589 502 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 NRLP54845 237 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 SNRPFP62306 86 aaKnown RBP24.15■■□□□ 1.46
C9orf3-213ENST00000471978 PKP1Q13835 747 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 HS2ST1Q7LGA3 356 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 TRAPPC11Q7Z392 1133 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 LIMS2Q7Z4I7 341 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 XXYLT1Q8NBI6 393 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 SPRYD3Q8NCJ5 442 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 KBTBD7Q8WVZ9 684 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 USP13Q92995 863 aaPredicted RBP24.15■■□□□ 1.46
C9orf3-213ENST00000471978 FUBP3Q96I24 572 aaKnown RBP eCLIP24.15■■□□□ 1.46
C9orf3-213ENST00000471978 FNBP1Q96RU3 617 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 SLC39A2Q9NP94 309 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 RBM12Q9NTZ6 932 aaKnown RBP24.15■■□□□ 1.46
C9orf3-213ENST00000471978 CCL26Q9Y258 94 aa24.15■■□□□ 1.46
C9orf3-213ENST00000471978 PVALEFA0A1B0GWK0 134 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 SOBPA7XYQ1 873 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 ATP2C2O75185 946 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 NOL4O94818 638 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 LMO2P25791 158 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 CXCL12P48061 93 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 CUL4BQ13620 913 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 GAS6Q14393 721 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 PON2Q15165 354 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 ITPRIPL2Q3MIP1 535 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 FAM171BQ6P995 826 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 C4orf50Q6ZRC1 276 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 MON1AQ86VX9 555 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 SCN4BQ8IWT1 228 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 CCDC127Q96BQ5 260 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 TRMT2BQ96GJ1 504 aaKnown RBP24.14■■□□□ 1.45
C9orf3-213ENST00000471978 MYRFLQ96LU7 910 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 MMS19Q96T76 1030 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 SYT15Q9BQS2 421 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 EPC1Q9H2F5 836 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 GKN1Q9NS71 199 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 TDP1Q9NUW8 608 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 CDH9Q9ULB4 789 aa24.14■■□□□ 1.45
C9orf3-213ENST00000471978 PSMC1P62191 440 aaKnown RBP24.13■■□□□ 1.45
C9orf3-213ENST00000471978 SATB1Q01826 763 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 DNM1Q05193 864 aaKnown RBP24.13■■□□□ 1.45
C9orf3-213ENST00000471978 CYP24A1Q07973 514 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 PSMD6Q15008 389 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 WDR44Q5JSH3 913 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 DGKKQ5KSL6 1271 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 SPEM1Q8N4L4 309 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 CGRRF1Q99675 332 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 FAM83CQ9BQN1 747 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 KIF9Q9HAQ2 790 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 NCDNQ9UBB6 729 aa24.13■■□□□ 1.45
C9orf3-213ENST00000471978 MAGEC2Q9UBF1 373 aaPredicted RBP24.13■■□□□ 1.45
C9orf3-213ENST00000471978 SMG5Q9UPR3 1016 aaKnown RBP24.13■■□□□ 1.45
C9orf3-213ENST00000471978 DENND4CQ5VZ89 1909 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 TADA3O75528 432 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 CST3P01034 146 aaPredicted RBP24.12■■□□□ 1.45
C9orf3-213ENST00000471978 PDGFRBP09619 1106 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 WARSP23381 471 aaKnown RBP24.12■■□□□ 1.45
C9orf3-213ENST00000471978 MAGEA11P43364 429 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 BMT2Q1RMZ1 405 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 Q6ZS52 159 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 GRAMD1CQ8IYS0 662 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 CEP57L1Q8IYX8 460 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 CRTAC1Q9NQ79 661 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 RCOR1Q9UKL0 485 aa24.12■■□□□ 1.45
C9orf3-213ENST00000471978 ZNF268Q14587 947 aaPredicted RBP24.11■■□□□ 1.45
C9orf3-213ENST00000471978 MAPRE1Q15691 268 aaKnown RBP24.11■■□□□ 1.45
C9orf3-213ENST00000471978 KNOP1Q1ED39 458 aaKnown RBP24.11■■□□□ 1.45
C9orf3-213ENST00000471978 TRIM68Q6AZZ1 485 aa24.11■■□□□ 1.45
C9orf3-213ENST00000471978 CC2D1AQ6P1N0 951 aaPredicted RBP24.11■■□□□ 1.45
C9orf3-213ENST00000471978 MYLPFQ96A32 169 aa24.11■■□□□ 1.45
C9orf3-213ENST00000471978 EBF3Q9H4W6 596 aa24.11■■□□□ 1.45
C9orf3-213ENST00000471978 TRPC7Q9HCX4 862 aa24.11■■□□□ 1.45
C9orf3-213ENST00000471978 CGNQ9P2M7 1197 aaKnown RBP24.11■■□□□ 1.45
C9orf3-213ENST00000471978 OBSL1O75147 1896 aa24.11■■□□□ 1.45
C9orf3-213ENST00000471978 BDNFP23560 247 aa24.1■■□□□ 1.45
C9orf3-213ENST00000471978 CYP27A1Q02318 531 aa24.1■■□□□ 1.45
C9orf3-213ENST00000471978 RUNX3Q13761 415 aa24.1■■□□□ 1.45
C9orf3-213ENST00000471978 CCINQ13939 588 aa24.1■■□□□ 1.45
C9orf3-213ENST00000471978 C12orf56Q8IXR9 622 aa24.1■■□□□ 1.45
C9orf3-213ENST00000471978 SECISBP2LQ93073 1101 aaKnown RBP24.1■■□□□ 1.45
C9orf3-213ENST00000471978 MRPL45Q9BRJ2 306 aaKnown RBP24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms