RNA–Protein interactions for RNA: ENST00000471861.5

CCDC78-208, Transcript of coiled-coil domain containing 78, human

TSL 3

Gene CCDC78, Length 743 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC78-208	ENST00000471861	TCHH	Q07283	1943 aa		21.33	■■□□□ 1
CCDC78-208	ENST00000471861	DMXL2	Q8TDJ6	3036 aa		21.33	■■□□□ 1
CCDC78-208	ENST00000471861	PTPRD	P23468	1912 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	ANKRD63	C9JTQ0	380 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	KHNYN	O15037	678 aa	Known RBP	21.32	■■□□□ 1
CCDC78-208	ENST00000471861	CSH1	P0DML2	217 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	CSH2	P0DML3	217 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	ZNF131	P52739	623 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	HMGN5	P82970	282 aa	Known RBP	21.32	■■□□□ 1
CCDC78-208	ENST00000471861	ATP2C1	P98194	919 aa	Predicted RBP	21.32	■■□□□ 1
CCDC78-208	ENST00000471861	PSMD2	Q13200	908 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	CCDC142	Q17RM4	750 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	CYP2U1	Q7Z449	544 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	DEFB124	Q8NES8	71 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	USP33	Q8TEY7	942 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	THADA	Q6YHU6	1953 aa		21.32	■■□□□ 1
CCDC78-208	ENST00000471861	NOL4	O94818	638 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	HNRNPL	P14866	589 aa	Known RBP eCLIP	21.31	■■□□□ 1
CCDC78-208	ENST00000471861	DDR2	Q16832	855 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	GAB4	Q2WGN9	574 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	ANO7	Q6IWH7	933 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	KIAA1211L	Q6NV74	962 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	DCP1B	Q8IZD4	617 aa	Known RBP	21.31	■■□□□ 1
CCDC78-208	ENST00000471861	KCTD17	Q8N5Z5	321 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	TTC16	Q8NEE8	873 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	MDGA1	Q8NFP4	955 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	ATP2A3	Q93084	1043 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	CNOT6L	Q96LI5	555 aa	Known RBP	21.31	■■□□□ 1
CCDC78-208	ENST00000471861	PKMYT1	Q99640	499 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	ASB7	Q9H672	318 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	TRPC7	Q9HCX4	862 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	DPP3	Q9NY33	737 aa		21.31	■■□□□ 1
CCDC78-208	ENST00000471861	FASN	P49327	2511 aa	Known RBP	21.31	■■□□□ 1
CCDC78-208	ENST00000471861		K7EQS6	105 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	PRPF40A	O75400	957 aa	Known RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	CHRM1	P11229	460 aa	Predicted RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	OPRD1	P41143	372 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	IFNAR2	P48551	515 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	ACAP1	Q15027	740 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	ZC2HC1C	Q53FD0	456 aa	Predicted RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	USP39	Q53GS9	565 aa	Known RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	LEO1	Q8WVC0	666 aa	Predicted RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	ZCCHC14	Q8WYQ9	949 aa	Known RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	TRMT2B	Q96GJ1	504 aa	Known RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	IKZF4	Q9H2S9	585 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	LINC00597	Q9H2U6	94 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	TMEM206	Q9H813	350 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	GCNT4	Q9P109	453 aa		21.3	■■□□□ 1
CCDC78-208	ENST00000471861	ASCC3	Q8N3C0	2202 aa	Known RBP	21.3	■■□□□ 1
CCDC78-208	ENST00000471861	TNRC6B	Q9UPQ9	1833 aa	Known RBP	21.29	■■□□□ 1
CCDC78-208	ENST00000471861	FREM2	Q5SZK8	3169 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	KPNA7	A9QM74	516 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	CYP2F1	P24903	491 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	SEC13	P55735	322 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	WNT7B	P56706	349 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	UAP1L1	Q3KQV9	507 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	SCARA3	Q6AZY7	606 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	CRELD2	Q6UXH1	353 aa	Predicted RBP	21.29	■■□□□ 1
CCDC78-208	ENST00000471861	C11orf74	Q86VG3	221 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	GPBP1	Q86WP2	473 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	MYCT1	Q8N699	235 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	FAM184A	Q8NB25	1140 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	OLIG1	Q8TAK6	271 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	EXOC4	Q96A65	974 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	MYRFL	Q96LU7	910 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	ANAPC1	Q9H1A4	1944 aa		21.29	■■□□□ 1
CCDC78-208	ENST00000471861	VWA3A	A6NCI4	1184 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	C2orf78	A6NCI8	922 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	HYAL3	O43820	417 aa	Predicted RBP	21.28	■■□□□ 1
CCDC78-208	ENST00000471861	TRAK2	O60296	914 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	CKM	P06732	381 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	USP17L7	P0C7H9	530 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	ACAT1	P24752	427 aa	Known RBP	21.28	■■□□□ 1
CCDC78-208	ENST00000471861	DHPS	P49366	369 aa	Predicted RBP	21.28	■■□□□ 1
CCDC78-208	ENST00000471861	ZXDB	P98169	803 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	RING1	Q06587	406 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	SV2C	Q496J9	727 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	C2orf27A	Q580R0	203 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	TMEM92	Q6UXU6	159 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	SFTPA1	Q8IWL2	248 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	PDCL2	Q8N4E4	241 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	ARL14EP	Q8N8R7	260 aa	Predicted RBP	21.28	■■□□□ 1
CCDC78-208	ENST00000471861	SH3RF2	Q8TEC5	729 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	PIGK	Q92643	395 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	CDK5RAP3	Q96JB5	506 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	PARVG	Q9HBI0	331 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	BLOC1S4	Q9NUP1	217 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	EVL	Q9UI08	416 aa	Predicted RBP	21.28	■■□□□ 1
CCDC78-208	ENST00000471861	KLK13	Q9UKR3	277 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	MMP17	Q9ULZ9	603 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	L1RE1	Q9UN81	338 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	STYXL1	Q9Y6J8	313 aa		21.28	■■□□□ 1
CCDC78-208	ENST00000471861	LAMA5	O15230	3695 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	HELZ	P42694	1942 aa	Known RBP	21.27	■■□□□ 1
CCDC78-208	ENST00000471861	TRAV19	A0A0A6YYK7	116 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	HCRT	O43612	131 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	FAM13A	O94988	1023 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	SCP2	P22307	547 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	GTF2B	Q00403	316 aa		21.27	■■□□□ 1
CCDC78-208	ENST00000471861	TSPY1	Q01534	308 aa		21.27	■■□□□ 1

Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms