RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 JAKMIP2Q96AA8 810 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 PCED1BQ96HM7 432 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 ELOVL4Q9GZR5 314 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 CRISPLD1Q9H336 500 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 CISHQ9NSE2 258 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 SLC27A5Q9Y2P5 690 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 NME7Q9Y5B8 376 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 GREB1Q4ZG55 1949 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 PES1O00541 588 aaKnown RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 ZNF197O14709 1029 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 TRIM66O15016 1216 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 FGF19O95750 216 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 ZNF18P17022 549 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 CD58P19256 250 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 LRMPQ12912 555 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 KRT31Q15323 416 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 PABPC1LQ4VXU2 614 aaKnown RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 MIIPQ5JXC2 388 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 OTOP3Q7RTS5 596 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 GRASPQ7Z6J2 395 aaPredicted RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 ACOT1Q86TX2 421 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 TTC9BQ8N6N2 239 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 PSMG2Q969U7 264 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 ACSF2Q96CM8 615 aaPredicted RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 DPEP3Q9H4B8 488 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 ASAH2Q9NR71 780 aa16.08■□□□□ 0.16
SNX13-205ENST00000471744 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.08■□□□□ 0.16
SNX13-205ENST00000471744 DNMT3BQ9UBC3 853 aaKnown RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 LIMA1Q9UHB6 759 aaKnown RBP16.08■□□□□ 0.16
SNX13-205ENST00000471744 ZNF638Q14966 1978 aaKnown RBP16.07■□□□□ 0.16
SNX13-205ENST00000471744 RHOP08100 348 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CSH1P0DML2 217 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CSH2P0DML3 217 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CYP2F1P24903 491 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 ANXA13P27216 316 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 TPM4P67936 248 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 ZP2Q05996 745 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 TAF12Q16514 161 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 FKBP15Q5T1M5 1219 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CYP4A22Q5TCH4 519 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 DHX40Q8IX18 779 aaKnown RBP16.07■□□□□ 0.16
SNX13-205ENST00000471744 PLCD3Q8N3E9 789 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 FAM200AQ8TCP9 573 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 ADAMTS19Q8TE59 1207 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 SMARCD1Q96GM5 515 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 ARID3AQ99856 593 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 TAB2Q9NYJ8 693 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 CEP72Q9P209 647 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 HMGXB4Q9UGU5 601 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 ZFP37Q9Y6Q3 630 aaPredicted RBP16.07■□□□□ 0.16
SNX13-205ENST00000471744 DENND4CQ5VZ89 1909 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 MYO10Q9HD67 2058 aa16.07■□□□□ 0.16
SNX13-205ENST00000471744 LRRC10BA6NIK2 292 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 MICAL2O94851 1124 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 ATF6P18850 670 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 BDNFP23560 247 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 FSHRP23945 695 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 PON1P27169 355 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 GRIK1P39086 918 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 EPHA5P54756 1037 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 MFAP3P55082 362 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 PDZD4Q76G19 769 aaPredicted RBP16.06■□□□□ 0.16
SNX13-205ENST00000471744 SCN4BQ8IWT1 228 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 TDRD5Q8NAT2 981 aaKnown RBP16.06■□□□□ 0.16
SNX13-205ENST00000471744 WHAMMQ8TF30 809 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 TMEM176AQ96HP8 235 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 C8orf48Q96LL4 319 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 CORO1BQ9BR76 489 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 MED10Q9BTT4 135 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 B3GNT5Q9BYG0 378 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 EHD2Q9NZN4 543 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 UXTQ9UBK9 157 aaPredicted RBP16.06■□□□□ 0.16
SNX13-205ENST00000471744 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 CDH22Q9UJ99 828 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 KIAA1257Q9ULG3 409 aa16.06■□□□□ 0.16
SNX13-205ENST00000471744 C19orf67A6NJJ6 358 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 LOC730098B7Z3J9 87 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 SOAT2O75908 522 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 PAEPP09466 180 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 RFX1P22670 979 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 COPB1P53618 953 aaKnown RBP16.05■□□□□ 0.16
SNX13-205ENST00000471744 RAD23BP54727 409 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 IQCB1Q15051 598 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 CCDC142Q17RM4 750 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 PHLDB3Q6NSJ2 640 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 DNAJB7Q7Z6W7 309 aaPredicted RBP16.05■□□□□ 0.16
SNX13-205ENST00000471744 FAM35AQ86V20 835 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 ARHGEF19Q8IW93 802 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 UBR7Q8N806 425 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 HEXIM2Q96MH2 286 aaKnown RBP16.05■□□□□ 0.16
SNX13-205ENST00000471744 TWNKQ96RR1 684 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 UHRF1Q96T88 793 aaPredicted RBP16.05■□□□□ 0.16
SNX13-205ENST00000471744 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
SNX13-205ENST00000471744 VPS16Q9H269 839 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 HSD3B7Q9H2F3 369 aa16.05■□□□□ 0.16
SNX13-205ENST00000471744 UBE2TQ9NPD8 197 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms