RNA–Protein interactions for RNA: ENST00000471455.1

CPSF4-211, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 569 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-211ENST00000471455 TMEM209Q96SK2 561 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 MMTAG2Q9BU76 263 aaKnown RBP9.86□□□□□ -0.83
CPSF4-211ENST00000471455 CRISPLD1Q9H336 500 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 PARVGQ9HBI0 331 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 GTSE1Q9NYZ3 720 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 TBX20Q9UMR3 447 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 SPAG17Q6Q759 2223 aa9.86□□□□□ -0.83
CPSF4-211ENST00000471455 VWA3AA6NCI4 1184 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 KRT37O76014 449 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 PRAMEF12O95522 483 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 CDC25AP30304 524 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 TNFSF9P41273 254 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 TAF6P49848 677 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 SLC12A3P55017 1021 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 POU5F1Q01860 360 aaKnown RBP9.85□□□□□ -0.83
CPSF4-211ENST00000471455 SRSF5Q13243 272 aaKnown RBP9.85□□□□□ -0.83
CPSF4-211ENST00000471455 KARSQ15046 597 aaKnown RBP9.85□□□□□ -0.83
CPSF4-211ENST00000471455 PDGFRLQ15198 375 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 FBXO43Q4G163 708 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 C9orf57Q5W0N0 161 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 MCTP1Q6DN14 999 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 SLFN12LQ6IEE8 588 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 CAMKK1Q8N5S9 505 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 MYCT1Q8N699 235 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 RASSF8Q8NHQ8 419 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 TTC8Q8TAM2 541 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 MRPS31Q92665 395 aaKnown RBP9.85□□□□□ -0.83
CPSF4-211ENST00000471455 ACDQ96AP0 544 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 ZFYVE19Q96K21 471 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 ZNF560Q96MR9 790 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 MKNK1Q9BUB5 465 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 C1QTNF2Q9BXJ5 285 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 ZCWPW1Q9H0M4 648 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 ASB7Q9H672 318 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 UXTQ9UBK9 157 aaPredicted RBP9.85□□□□□ -0.83
CPSF4-211ENST00000471455 C2CD2Q9Y426 696 aa9.85□□□□□ -0.83
CPSF4-211ENST00000471455 GREB1Q4ZG55 1949 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 A0A0B4J269 797 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 BMP15O95972 392 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 ADRB2P07550 413 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 ZNF806P0C7X5 589 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 DRD1P21728 446 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 UBA7P41226 1012 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 PNPLA4P41247 253 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 SMCPP49901 116 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-211ENST00000471455 GUCY2FP51841 1108 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 CYP4F8P98187 520 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 TSPY1Q01534 308 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 RUNX3Q13761 415 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 NR6A1Q15406 480 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 ELF2Q15723 593 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 NFE2Q16621 373 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-211ENST00000471455 SV2CQ496J9 727 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 TMEM119Q4V9L6 283 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 TMEM196Q5HYL7 178 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 JADE1Q6IE81 842 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 C11orf74Q86VG3 221 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 GPBP1Q86WP2 473 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 NT5DC4Q86YG4 428 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 CMTM8Q8IZV2 173 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 CPA6Q8N4T0 437 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 TTC9BQ8N6N2 239 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 OR10T2Q8NGX3 314 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 PNMA5Q96PV4 448 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 LPIN3Q9BQK8 851 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 REEP2Q9BRK0 252 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 PYM1Q9BRP8 204 aaKnown RBP9.84□□□□□ -0.83
CPSF4-211ENST00000471455 ARRDC1-AS1Q9H2J1 176 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 VPS45Q9NRW7 570 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 ABI2Q9NYB9 513 aaPredicted RBP9.84□□□□□ -0.83
CPSF4-211ENST00000471455 CPSF3Q9UKF6 684 aaKnown RBP9.84□□□□□ -0.83
CPSF4-211ENST00000471455 PCDHB5Q9Y5E4 795 aa9.84□□□□□ -0.83
CPSF4-211ENST00000471455 USP24Q9UPU5 2620 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 H3BQV1 296 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 PIRO00625 290 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 CYB561D2O14569 222 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 TRDMT1O14717 391 aaKnown RBP9.83□□□□□ -0.84
CPSF4-211ENST00000471455 PPEF2O14830 753 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 AXIN1O15169 862 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 EXTL3O43909 919 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 TRAK2O60296 914 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 FAM189A1O60320 539 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 SOAT2O75908 522 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 RHOBTB1O94844 696 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 NFICP08651 508 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 CSH1P0DML2 217 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 CSH2P0DML3 217 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 HAPLN1P10915 354 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-211ENST00000471455 ATF6P18850 670 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 VARSP26640 1264 aaKnown RBP9.83□□□□□ -0.84
CPSF4-211ENST00000471455 MPLP40238 635 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 RAP1GAPP47736 663 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 ZNF131P52739 623 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 RPL10AP62906 217 aaKnown RBP9.83□□□□□ -0.84
CPSF4-211ENST00000471455 SHC2P98077 582 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 TNK2Q07912 1038 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 ZNF268Q14587 947 aaPredicted RBP9.83□□□□□ -0.84
CPSF4-211ENST00000471455 POSTNQ15063 836 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 IL17AQ16552 155 aa9.83□□□□□ -0.84
CPSF4-211ENST00000471455 ADALQ6DHV7 355 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms