RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 UIMC1Q96RL1 719 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 FNBP1Q96RU3 617 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 PNKPQ96T60 521 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 AGPAT1Q99943 283 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 RHOXF2Q9BQY4 288 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 NFKBIZQ9BYH8 718 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 IMPG2Q9BZV3 1241 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 GPR88Q9GZN0 384 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 TMEM117Q9H0C3 514 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 POLR3FQ9H1D9 316 aaPredicted RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ABCB6Q9NP58 842 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 XPNPEP1Q9NQW7 623 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 RAB20Q9NX57 234 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 HDAC6Q9UBN7 1215 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 SEPT3Q9UH03 358 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 DMGDHQ9UI17 866 aaKnown RBP6.05□□□□□ -1.44
HDAC8-216ENST00000470998 TMEM59LQ9UK28 342 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 AMFRQ9UKV5 643 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 DUSP10Q9Y6W6 482 aa6.05□□□□□ -1.44
HDAC8-216ENST00000470998 ABHD14A-ACY1A0A1B0GW23 586 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CCDC66A2RUB6 948 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CARNS1A5YM72 827 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 LRRIQ3A6PVS8 624 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 NOP56O00567 594 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 KCNK3O14649 394 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 NDC80O14777 642 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ZBTB39O15060 712 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ASAP2O43150 1006 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 BUB1O43683 1085 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 OPA1O60313 960 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CAND2O75155 1236 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 TOM1L1O75674 476 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CXCL10P02778 98 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 RARAP10276 462 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 SELPP16109 830 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PCSK2P16519 638 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 POU3F3P20264 500 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ADSSP30520 456 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ADH7P40394 386 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 SLC1A1P43005 524 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 STAT5BP51692 787 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 GALCP54803 685 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 YWHAEP62258 255 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 GPC5P78333 572 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CBX1P83916 185 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CDR2Q01850 454 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PPP3CAQ08209 521 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 DMTNQ08495 405 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PPFIA1Q13136 1202 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 MTMR3Q13615 1198 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 DHX34Q14147 1143 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 TERF2Q15554 542 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 TARBP2Q15633 366 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ZACNQ401N2 412 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CELF3Q5SZQ8 465 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 C1orf220Q5T0J3 134 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CDCA2Q69YH5 1023 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PHLDB3Q6NSJ2 640 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CCNI2Q6ZMN8 369 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 C15orf39Q6ZRI6 1047 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 LRRC8DQ7L1W4 858 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CROCCP2Q86T23 111 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 DAAM2Q86T65 1068 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 NT5DC3Q86UY8 548 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 WDR49Q8IV35 697 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 GLYCTKQ8IVS8 523 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 TTC39CQ8N584 583 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 LNX1Q8TBB1 728 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 HELQQ8TDG4 1101 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 ATP8B4Q8TF62 1192 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 AENQ8WTP8 325 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PSPC1Q8WXF1 523 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 KAT2BQ92831 832 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 LRRC45Q96CN5 670 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 VWCEQ96DN2 955 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 VCPIP1Q96JH7 1222 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 SPATA33Q96N06 139 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 RUFY1Q96T51 708 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 CGRRF1Q99675 332 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 MRPL4Q9BYD3 311 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 RAB17Q9H0T7 212 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 NKX2-4Q9H2Z4 354 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 UBE2TQ9NPD8 197 aaPredicted RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PARP2Q9UGN5 583 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 RASAL2Q9UJF2 1139 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 SALL4Q9UJQ4 1053 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 NOCTQ9UK39 431 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 HCN2Q9UL51 889 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 FNDC3AQ9Y2H6 1198 aaKnown RBP6.04□□□□□ -1.44
HDAC8-216ENST00000470998 PCDHB2Q9Y5E7 798 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 COL1A2P08123 1366 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 MCM3APO60318 1980 aa6.04□□□□□ -1.44
HDAC8-216ENST00000470998 LAMA3Q16787 3333 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 A0A0B4J269 797 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 IGKV6-21A0A0C4DH24 114 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 C17orf102A2RUQ5 167 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 GOLGA6BA6NDN3 693 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 GRXCR1A8MXD5 290 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 TMCO5BA8MYB1 307 aa6.03□□□□□ -1.44
HDAC8-216ENST00000470998 GOLGA8KD6RF30 607 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms