RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 KRTAP1-5Q9BYS1 174 aa3.31□□□□□ -1.88
UBXN4-206ENST00000470687 WDR11Q9BZH6 1224 aa3.31□□□□□ -1.88
UBXN4-206ENST00000470687 MRPL46Q9H2W6 279 aaKnown RBP3.31□□□□□ -1.88
UBXN4-206ENST00000470687 SMURF2Q9HAU4 748 aa3.31□□□□□ -1.88
UBXN4-206ENST00000470687 ANKFY1Q9P2R3 1169 aa3.31□□□□□ -1.88
UBXN4-206ENST00000470687 NCDNQ9UBB6 729 aa3.31□□□□□ -1.88
UBXN4-206ENST00000470687 KIAA1210Q9ULL0 1709 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 ADGRB1O14514 1584 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 TMEM200CA6NKL6 621 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 F8W8V4 182 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 EXOC5O00471 708 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 APAF1O14727 1248 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 TPP1O14773 563 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 GRM6O15303 877 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 PHF2O75151 1096 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 GPR32O75388 356 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 C1RP00736 705 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 GNAT2P19087 354 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 CCND1P24385 295 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 APOBEC3AP31941 199 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 PTPN7P35236 360 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 KRTAP10-6P60371 365 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 MAP9Q49MG5 647 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 IFIT1BQ5T764 474 aaKnown RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 B3GNTL1Q67FW5 361 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 KRT40Q6A162 431 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 SP5Q6BEB4 398 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 APOA5Q6Q788 366 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 APBB1IPQ7Z5R6 666 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 BOLLQ8N9W6 283 aaKnown RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 C9orf106Q8NAJ2 232 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 FAM156AQ8NDB6 213 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 SIMC1Q8NDZ2 872 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 IL17RDQ8NFM7 739 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 KLHDC4Q8TBB5 520 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 SCARB1Q8WTV0 552 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 KLHL32Q96NJ5 620 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 FAM193BQ96PV7 902 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 PSMD1Q99460 953 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 C7orf25Q9BPX7 421 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 NAA15Q9BXJ9 866 aaKnown RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 SLC46A2Q9BY10 475 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 SPON1Q9HCB6 807 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 TERF2IPQ9NYB0 399 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 RNF7Q9UBF6 113 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 STAP2Q9UGK3 403 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 EPN1Q9Y6I3 576 aaPredicted RBP3.3□□□□□ -1.88
UBXN4-206ENST00000470687 ITSN1Q15811 1721 aa3.3□□□□□ -1.88
UBXN4-206ENST00000470687 KIAA0232Q92628 1395 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 NINLQ9Y2I6 1382 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 CGNL1Q0VF96 1302 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 MYO1FO00160 1098 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 SLC43A1O75387 559 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 FCER1AP12319 257 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 FDXRP22570 491 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 XPAP23025 273 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 HTR1BP28222 390 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 PHKA1P46020 1223 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 AVPR1BP47901 424 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 CHN2P52757 468 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 ELLP55199 621 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 TBX4P57082 545 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 RAB1AP62820 205 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 TCF15Q12870 199 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 FOXF2Q12947 444 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 MAPK7Q13164 816 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 UBXN2BQ14CS0 331 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 ERCC6LQ2NKX8 1250 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 PDCD4Q53EL6 469 aaKnown RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 AGAP9Q5VTM2 703 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 HEATR3Q7Z4Q2 680 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 DEFB132Q7Z7B7 95 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 ARHGEF19Q8IW93 802 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 WDR75Q8IWA0 830 aaKnown RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 FAM43AQ8N2R8 423 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 LCORLQ8N3X6 602 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 LINC00476Q8WZB0 136 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 SMG7Q92540 1137 aaKnown RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 ANKS1AQ92625 1134 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 HDAC10Q969S8 669 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 C1GALT1C1Q96EU7 318 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 COQ10AQ96MF6 247 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 SPATA5L1Q9BVQ7 753 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 TMEM60Q9H2L4 133 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 GSTO2Q9H4Y5 243 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 LANCL2Q9NS86 450 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 CTTNBP2NLQ9P2B4 639 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 POLHQ9Y253 713 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 CFAP20Q9Y6A4 193 aaKnown RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 RGPD8O14715 1765 aaPredicted RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 GLI3P10071 1580 aa3.29□□□□□ -1.88
UBXN4-206ENST00000470687 POLR2AP24928 1970 aaKnown RBP3.29□□□□□ -1.88
UBXN4-206ENST00000470687 COL3A1P02461 1466 aaPredicted RBP3.28□□□□□ -1.88
UBXN4-206ENST00000470687 CRB1P82279 1406 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 CCDC7Q96M83 1385 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 WDR17Q8IZU2 1322 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 ALS2Q96Q42 1657 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 FAM171A2A8MVW0 826 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 PJA2O43164 708 aa3.28□□□□□ -1.88
UBXN4-206ENST00000470687 ENDOD1O94919 500 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms