RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ASLP04424 464 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 URODP06132 367 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 FYNP06241 537 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 UBTFL6P0CB48 400 aaPredicted RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 PYGMP11217 842 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 MYL4P12829 197 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 VAV1P15498 845 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 HNF4AP41235 474 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GARSP41250 739 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TMED10P49755 219 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 SIK1P57059 783 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CHMP4BP1P59074 171 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 PPP2R2BQ00005 443 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CHRNEQ04844 493 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 C19orf57Q0VDD7 668 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 FOXO1Q12778 655 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 MYO1EQ12965 1108 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 RASGRF1Q13972 1273 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM14Q14142 442 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GIT2Q14161 759 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GAS6Q14393 721 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 KRT32Q14532 448 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 SF3B4Q15427 424 aaKnown RBP eCLIP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC85BQ15834 202 aaPredicted RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 MMEL1Q495T6 779 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ACCSLQ4AC99 568 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 EFHC1Q5JVL4 640 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 C6orf183Q5T699 404 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TCERG1LQ5VWI1 586 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 SNRNP48Q6IEG0 339 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 AAGABQ6PD74 315 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM65Q6PJ69 517 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ADCK1Q86TW2 530 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 LONP2Q86WA8 852 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 VSIG1Q86XK7 387 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 KIAA0319LQ8IZA0 1049 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ZNF654Q8IZM8 581 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 LIX1Q8N485 282 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC33Q8N5R6 958 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 MAGEB6Q8N7X4 407 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 NIPA2Q8N8Q9 360 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 PIP4K2CQ8TBX8 421 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ASAP3Q8TDY4 903 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GANCQ8TET4 914 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 NANOS1Q8WY41 292 aaKnown RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TTC9Q92623 222 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 BRF1Q92994 677 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 MSANTD3Q96H12 275 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 RADILQ96JH8 1075 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TCEANC2Q96MN5 208 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TSNARE1Q96NA8 513 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TBCBQ99426 244 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 BCL7BQ9BQE9 202 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 WACQ9BTA9 647 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 ACPTQ9BZG2 426 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 BHLHE41Q9C0J9 482 aaPredicted RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CARD9Q9H257 536 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 GHITMQ9H3K2 345 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TOPORSQ9NS56 1045 aaPredicted RBP5.39□□□□□ -1.55
COL3A1-205ENST00000470167 KBTBD4Q9NVX7 518 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 OR6C2Q9NZP2 312 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 FBXO40Q9UH90 709 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 FAM153AQ9UHL3 310 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 NAGPAQ9UK23 515 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 PPM1HQ9ULR3 514 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TRIM33Q9UPN9 1127 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 INVSQ9Y283 1065 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 INPP5FQ9Y2H2 1132 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 STARD13Q9Y3M8 1113 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 TTC41PQ6P2S7 1318 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 CAMSAP2Q08AD1 1489 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 IFT140Q96RY7 1462 aa5.39□□□□□ -1.55
COL3A1-205ENST00000470167 WDR97A6NE52 1622 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 A0A087WZG4 1122 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 A0A0B4J269 797 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ESYT3A0FGR9 886 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TYW5A2RUC4 315 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DBX1A6NMT0 343 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 DCDC2CA8MYV0 355 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PDE2AO00408 941 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SLC9A3R1O14745 358 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 BET1O15155 118 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 EIF3HO15372 352 aaKnown RBP eCLIP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 MAGEB3O15480 346 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 FRS3O43559 492 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ECE2O60344 883 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TMEM127O75204 238 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SLC22A3O75751 556 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 SEC31AO94979 1220 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CYP11A1P05108 521 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GLAP06280 429 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 PGRP06401 933 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 TUBBP07437 444 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 ASNSP08243 561 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 RPS17P08708 135 aaKnown RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CELA3AP09093 270 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 GSTM1P09488 218 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CCDC192P0DO97 292 aa5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CYP2A6P11509 494 aaPredicted RBP5.38□□□□□ -1.55
COL3A1-205ENST00000470167 CPB1P15086 417 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms