RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 GOLPH3Q9H4A6 298 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 CD209Q9NNX6 404 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 TBC1D13Q9NVG8 400 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 AHSPQ9NZD4 102 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 PHLPP1O60346 1717 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 IQGAP1P46940 1657 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 MYO1CO00159 1063 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 LIN7AO14910 233 aaPredicted RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 PARNO95453 639 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 FGF19O95750 216 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 VDRP11473 427 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 DNAJB1P25685 340 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 SKIV2L2P42285 1042 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 CRKP46108 304 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 NPY2RP49146 381 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 RPL10AP62906 217 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF200P98182 395 aaPredicted RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 COG2Q14746 738 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 CNGA2Q16280 664 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 CCNG2Q16589 344 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 FAM83EQ2M2I3 478 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 MRNIPQ6NTE8 343 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 CCDC137Q6PK04 289 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 HSPH1Q92598 858 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 QRFPRQ96P65 431 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 ERP44Q9BS26 406 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 AASDHPPTQ9NRN7 309 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 PPARGC1AQ9UBK2 798 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 PAIP2BQ9ULR5 123 aaKnown RBP6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 EFR3BQ9Y2G0 817 aa6.39□□□□□ -1.39
CCDC144A-212ENST00000470068 SF3B1O75533 1304 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CCDC130P13994 396 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 IFNGR2P38484 337 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 FXR1P51114 621 aaKnown RBP eCLIP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 COPZ1P61923 177 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 TFAMQ00059 246 aaKnown RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 C1orf146Q5VVC0 180 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 ZDHHC20Q5W0Z9 365 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 MOB2Q70IA6 237 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RRM2BQ7LG56 351 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 TUBGCP3Q96CW5 907 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PRMT6Q96LA8 375 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 TGS1Q96RS0 853 aaKnown RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 MMP19Q99542 508 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CALN1Q9BXU9 219 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 AGXT2Q9BYV1 514 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 DCLRE1BQ9H816 532 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PRDM8Q9NQV8 689 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 KLC4Q9NSK0 619 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 MST1RQ04912 1400 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 KRT87PA6NCN2 255 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PLA2G6O60733 806 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RPN2P04844 631 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PAEPP09466 180 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 NPTX2P47972 431 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 LIG3P49916 1009 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RAD23AP54725 363 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RTP1P59025 263 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PRAMEP78395 509 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SLC20A2Q08357 652 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 GNA13Q14344 377 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 DRAP1Q14919 205 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RFX4Q33E94 735 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SPATS1Q496A3 300 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CRELD2Q6UXH1 353 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 OTOP2Q7RTS6 562 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SAPCD2Q86UD0 394 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 KRT73Q86Y46 540 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF34Q8IZ26 560 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 STK40Q8N2I9 435 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CHCHD4Q8N4Q1 142 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 DNAJB8Q8NHS0 232 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 UCMAQ8WVF2 138 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 UBE2E3Q969T4 207 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 NSL1Q96IY1 281 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PLIN2Q99541 437 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SP110Q9HB58 689 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 KIF1AQ12756 1690 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 UNCXA6NJT0 531 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 CNOT3O75175 753 aaKnown RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PTGER2P43116 358 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 NAMPTP43490 491 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SERPINB8P50452 374 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 HMGCS2P54868 508 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SMIM11AP58511 58 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PSMC1P62191 440 aaKnown RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PRKCQQ04759 706 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 YWHAHQ04917 246 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 ZNF568Q3ZCX4 644 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PRR23CQ6ZRP0 262 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 C11orf57Q6ZUT1 292 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 OTOP1Q7RTM1 612 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 SNIP1Q8TAD8 396 aaKnown RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 OTUD7AQ8TE49 926 aaPredicted RBP6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 RIT1Q92963 219 aa6.38□□□□□ -1.39
CCDC144A-212ENST00000470068 PGBD1Q96JS3 809 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms