RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 TRIM68Q6AZZ1 485 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 CNNM4Q6P4Q7 775 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 C1orf228Q6PIY5 440 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 STXBP4Q6ZWJ1 553 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 ERMP1Q7Z2K6 904 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 CHFRQ96EP1 664 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 HPDLQ96IR7 371 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 C7orf25Q9BPX7 421 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 LRRC27Q9C0I9 530 aa26.26■■□□□ 1.79
PTCH1-210ENST00000468211 K7ESF4 209 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 EIF3DO15371 548 aaKnown RBP eCLIP26.25■■□□□ 1.79
PTCH1-210ENST00000468211 AVPR1AP37288 418 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 LHX1P48742 406 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 RPL10AP62906 217 aaKnown RBP26.25■■□□□ 1.79
PTCH1-210ENST00000468211 EHHADHQ08426 723 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 CCINQ13939 588 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 ITPRIPL2Q3MIP1 535 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 FAM26FQ5R3K3 315 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 FAM171BQ6P995 826 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 MON1AQ86VX9 555 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 IQUBQ8NA54 791 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 RDH13Q8NBN7 331 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 SPATA18Q8TC71 538 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 BLZF1Q9H2G9 400 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 AGPAT3Q9NRZ7 376 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 TDP1Q9NUW8 608 aa26.25■■□□□ 1.79
PTCH1-210ENST00000468211 THG1LQ9NWX6 298 aaKnown RBP26.25■■□□□ 1.79
PTCH1-210ENST00000468211 HELZP42694 1942 aaKnown RBP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 CHURC1-FNTBB4DL54 471 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 POLR2DO15514 142 aaKnown RBP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 TNNC2P02585 160 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 DDX6P26196 483 aaKnown RBP eCLIP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 FNTBP49356 437 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 NRLP54845 237 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 PSMC1P62191 440 aaKnown RBP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 AMPD3Q01432 767 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 MYO1EQ12965 1108 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 LPAL2Q16609 132 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 DUOXA2Q1HG44 320 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 CFAP221Q4G0U5 840 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 DGKKQ5KSL6 1271 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 SPATA2LQ8IUW3 424 aaPredicted RBP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 NELFCDQ8IXH7 590 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 SCFD1Q8WVM8 642 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 MRPS31Q92665 395 aaKnown RBP26.24■■□□□ 1.79
PTCH1-210ENST00000468211 MYRFLQ96LU7 910 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 SLC22A12Q96S37 553 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 EBF3Q9H4W6 596 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 CRTAC1Q9NQ79 661 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 ZMYM5Q9UJ78 669 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 NME7Q9Y5B8 376 aa26.24■■□□□ 1.79
PTCH1-210ENST00000468211 CLIC2O15247 247 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 ZSCAN22P10073 491 aaPredicted RBP26.23■■□□□ 1.79
PTCH1-210ENST00000468211 TGM1P22735 817 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 PCSK1P29120 753 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 PPP2R5DQ14738 602 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 SURF1Q15526 300 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 DPH6Q7L8W6 267 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 TRAPPC11Q7Z392 1133 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 WDR49Q8IV35 697 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 SCN4BQ8IWT1 228 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 TRMT2BQ96GJ1 504 aaKnown RBP26.23■■□□□ 1.79
PTCH1-210ENST00000468211 CYP2S1Q96SQ9 504 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 SYT15Q9BQS2 421 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 PCDHA7Q9UN72 937 aa26.23■■□□□ 1.79
PTCH1-210ENST00000468211 F13A1P00488 732 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 CST3P01034 146 aaPredicted RBP26.22■■□□□ 1.79
PTCH1-210ENST00000468211 ARSAP15289 507 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 CYP2J2P51589 502 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 SRSF5Q13243 272 aaKnown RBP26.22■■□□□ 1.79
PTCH1-210ENST00000468211 RUNX3Q13761 415 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 PKP1Q13835 747 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 SNRNP35Q16560 246 aaKnown RBP26.22■■□□□ 1.79
PTCH1-210ENST00000468211 PKN3Q6P5Z2 889 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 UNC13DQ70J99 1090 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 GZF1Q9H116 711 aaPredicted RBP26.22■■□□□ 1.79
PTCH1-210ENST00000468211 KIAA1586Q9HCI6 787 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 PARD6AQ9NPB6 346 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 RALGAPA1Q6GYQ0 2036 aa26.22■■□□□ 1.79
PTCH1-210ENST00000468211 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 SOBPA7XYQ1 873 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 HRO43593 1189 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 PAPSS2O95340 614 aaPredicted RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 PDGFRBP09619 1106 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 DLATP10515 647 aaKnown RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 HEATR6Q6AI08 1181 aaKnown RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 MYLPFQ96A32 169 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 FUBP3Q96I24 572 aaKnown RBP eCLIP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 MRPL45Q9BRJ2 306 aaKnown RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 KIF9Q9HAQ2 790 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 DLL3Q9NYJ7 618 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 UXTQ9UBK9 157 aaPredicted RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 R3HCC1Q9Y3T6 440 aaKnown RBP26.21■■□□□ 1.79
PTCH1-210ENST00000468211 MYO16Q9Y6X6 1858 aa26.21■■□□□ 1.79
PTCH1-210ENST00000468211 WARSP23381 471 aaKnown RBP26.2■■□□□ 1.78
PTCH1-210ENST00000468211 MAGEA11P43364 429 aa26.2■■□□□ 1.78
PTCH1-210ENST00000468211 CYP24A1Q07973 514 aa26.2■■□□□ 1.78
PTCH1-210ENST00000468211 CUL4BQ13620 913 aa26.2■■□□□ 1.78
PTCH1-210ENST00000468211 ZNF268Q14587 947 aaPredicted RBP26.2■■□□□ 1.78
PTCH1-210ENST00000468211 RSPO4Q2I0M5 234 aaPredicted RBP26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms