RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 DAB2IPQ5VWQ8 1189 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 XYLT1Q86Y38 959 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 TMEM86AQ8N2M4 240 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 MSANTD4Q8NCY6 345 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 TBC1D13Q9NVG8 400 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 PCDHB7Q9Y5E2 793 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 TMEM191CA6NGB0 347 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 MIF4GDA9UHW6 222 aaKnown RBP21.75■■□□□ 1.07
TMEM53-207ENST00000468117 FAM163BP0C2L3 166 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 RGS7P49802 495 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 CDR1P51861 262 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 C2orf54Q08AI8 447 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 PPP1R15BQ5SWA1 713 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 DCUN1D2Q6PH85 259 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 SLC2A14Q8TDB8 520 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 DNAI2Q9GZS0 605 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 ELAC1Q9H777 363 aaKnown RBP21.75■■□□□ 1.07
TMEM53-207ENST00000468117 RNF14Q9UBS8 474 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 TBX21Q9UL17 535 aa21.75■■□□□ 1.07
TMEM53-207ENST00000468117 PROSCO94903 275 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 CXCL10P02778 98 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 GABRB2P47870 512 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 RNASELQ05823 741 aaKnown RBP21.74■■□□□ 1.07
TMEM53-207ENST00000468117 DSC1Q08554 894 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 KIAA0319Q5VV43 1072 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 PMF1Q6P1K2 205 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 ZNF572Q7Z3I7 529 aaPredicted RBP21.74■■□□□ 1.07
TMEM53-207ENST00000468117 UBL4BQ8N7F7 174 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 ANKLE1Q8NAG6 615 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 SPATA4Q8NEY3 305 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 RPGRIP1Q96KN7 1286 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 SELENOOQ9BVL4 669 aa21.74■■□□□ 1.07
TMEM53-207ENST00000468117 LOC101059915A0A1B0GWI6 518 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 E5RJQ4 531 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 HSPA1AP0DMV8 641 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 HSPA1BP0DMV9 641 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 PTPN1P18031 435 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 PDE4CQ08493 712 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 DCLRE1AQ6PJP8 1040 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 SLC35F5Q8WV83 523 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 C11orf49Q9H6J7 331 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 TMEM39AQ9NV64 488 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 KANSL3Q9P2N6 904 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 ODC1P11926 461 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 TKTP29401 623 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 CTNNA1P35221 906 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 LHX1P48742 406 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 CTCFP49711 727 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 GATMP50440 423 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 PEX5P50542 639 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 ZNF211Q13398 564 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 FNDC1Q4ZHG4 1894 aaPredicted RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 COLGALT2Q8IYK4 626 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 ABI1Q8IZP0 508 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 ANKRD52Q8NB46 1076 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 IPO4Q8TEX9 1081 aaKnown RBP21.73■■□□□ 1.07
TMEM53-207ENST00000468117 CARD9Q9H257 536 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 WDR35Q9P2L0 1181 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 DNAJB4Q9UDY4 337 aa21.73■■□□□ 1.07
TMEM53-207ENST00000468117 PARNO95453 639 aaKnown RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 KRT3P12035 628 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 GSCP56915 257 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 OGDHQ02218 1023 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 ZNF252P-AS1Q0IIN9 211 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 ZNF268Q14587 947 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 LRRC26Q2I0M4 334 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 RSPH1Q8WYR4 309 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 IP6K2Q9UHH9 426 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 LRFN2Q9ULH4 789 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 PCDHA3Q9Y5H8 950 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 SIGLEC16A6NMB1 481 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 CLTBP09497 229 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 RFC1P35251 1148 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 SLC1A1P43005 524 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 BCAT1P54687 386 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 TAP1Q03518 808 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 BST2Q10589 180 aaKnown RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 MDH1BQ5I0G3 518 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 FUKQ8N0W3 1084 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 JOSD2Q8TAC2 188 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 ACTRT1Q8TDG2 376 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 FAM193BQ96PV7 902 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 SYT15Q9BQS2 421 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 CRTAC1Q9NQ79 661 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 METTL5Q9NRN9 209 aaKnown RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 RNF216Q9NWF9 866 aaPredicted RBP21.72■■□□□ 1.07
TMEM53-207ENST00000468117 USTQ9Y2C2 406 aa21.72■■□□□ 1.07
TMEM53-207ENST00000468117 CCDC66A2RUB6 948 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 M0QZQ0 153 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 CLDN5O00501 218 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 SETSIPP0DME0 302 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 CTNNA2P26232 953 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 OR1G1P47890 313 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 AADACL2Q6P093 401 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 RASGEF1CQ8N431 466 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 MCRS1Q96EZ8 462 aa21.71■■□□□ 1.07
TMEM53-207ENST00000468117 RBM12Q9NTZ6 932 aaKnown RBP21.71■■□□□ 1.07
TMEM53-207ENST00000468117 PGRMC1O00264 195 aaKnown RBP21.7■■□□□ 1.06
TMEM53-207ENST00000468117 RHOXF2BP0C7M4 288 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms