RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 PLCB2Q00722 1185 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 ZC3H14Q6PJT7 736 aaKnown RBP20.42■□□□□ 0.86
COL7A1-207ENST00000467985 SYAP1Q96A49 352 aaPredicted RBP20.42■□□□□ 0.86
COL7A1-207ENST00000467985 RSPRY1Q96DX4 576 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 TRMT2BQ96GJ1 504 aaKnown RBP20.42■□□□□ 0.86
COL7A1-207ENST00000467985 CCDC34Q96HJ3 373 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 CEP295NLQ96MC4 621 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 SYT15Q9BQS2 421 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 SNX25Q9H3E2 840 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 DMAC2Q9NW81 257 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 SPATA6Q9NWH7 488 aaPredicted RBP20.42■□□□□ 0.86
COL7A1-207ENST00000467985 THG1LQ9NWX6 298 aaKnown RBP20.42■□□□□ 0.86
COL7A1-207ENST00000467985 COL4A3Q01955 1670 aa20.42■□□□□ 0.86
COL7A1-207ENST00000467985 COL4A2P08572 1712 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 TICRRQ7Z2Z1 1910 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 MYBPHLA2RUH7 354 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 PRR23AA6NEV1 266 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 PHACTR2O75167 634 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 CST3P01034 146 aaPredicted RBP20.41■□□□□ 0.86
COL7A1-207ENST00000467985 F11P03951 625 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 AVPR1AP37288 418 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 DDR2Q16832 855 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 WDR72Q3MJ13 1102 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 VSTM1Q6UX27 236 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 CMTM8Q8IZV2 173 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 CELF5Q8N6W0 485 aaKnown RBP20.41■□□□□ 0.86
COL7A1-207ENST00000467985 FSIP1Q8NA03 581 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 MRPS31Q92665 395 aaKnown RBP20.41■□□□□ 0.86
COL7A1-207ENST00000467985 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 MYRFLQ96LU7 910 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 SLC46A2Q9BY10 475 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 KCTD10Q9H3F6 313 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 C8orf33Q9H7E9 229 aaPredicted RBP20.41■□□□□ 0.86
COL7A1-207ENST00000467985 MAGEC2Q9UBF1 373 aaPredicted RBP20.41■□□□□ 0.86
COL7A1-207ENST00000467985 FBXO4Q9UKT5 387 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 NCANO14594 1321 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 CACNA1IQ9P0X4 2223 aa20.41■□□□□ 0.86
COL7A1-207ENST00000467985 LAMTOR5O43504 91 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 NOL4O94818 638 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 RHOBTB3O94955 611 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 SP9P0CG40 484 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 LMO2P25791 158 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 GNL1P36915 607 aaPredicted RBP20.4■□□□□ 0.86
COL7A1-207ENST00000467985 GPR15P49685 360 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 CLDN10P78369 228 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 ZNF528Q3MIS6 628 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 TMEM150AQ86TG1 271 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 BPIFB1Q8TDL5 484 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 PARD3BQ8TEW8 1205 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 FAM3CQ92520 227 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 ZNF516Q92618 1163 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 IER2Q9BTL4 223 aa20.4■□□□□ 0.86
COL7A1-207ENST00000467985 GZF1Q9H116 711 aaPredicted RBP20.4■□□□□ 0.86
COL7A1-207ENST00000467985 MAGED2Q9UNF1 606 aaPredicted RBP20.4■□□□□ 0.86
COL7A1-207ENST00000467985 FAM186AA6NE01 2351 aa20.39■□□□□ 0.86
COL7A1-207ENST00000467985 DENND4CQ5VZ89 1909 aa20.39■□□□□ 0.86
COL7A1-207ENST00000467985 SHISA7A6NL88 538 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 SLC38A8A6NNN8 435 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 CALUO43852 315 aaPredicted RBP20.39■□□□□ 0.85
COL7A1-207ENST00000467985 ATP2C2O75185 946 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 PRAMEF12O95522 483 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 NR3C1P04150 777 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 PDGFRBP09619 1106 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 KPNA1P52294 538 aaPredicted RBP20.39■□□□□ 0.85
COL7A1-207ENST00000467985 MYL6P60660 151 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 PSMC1P62191 440 aaKnown RBP20.39■□□□□ 0.85
COL7A1-207ENST00000467985 BIRC3Q13489 604 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 KRBA2Q6ZNG9 492 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 MON1AQ86VX9 555 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 SCN4BQ8IWT1 228 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 MYCBPAPQ8TBZ2 947 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 SPATA17Q96L03 361 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 VRTNQ9H8Y1 702 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 KIF9Q9HAQ2 790 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 CRTAC1Q9NQ79 661 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 EHD2Q9NZN4 543 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 FRMD4BQ9Y2L6 1034 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 PTPRZ1P23471 2315 aaPredicted RBP20.39■□□□□ 0.85
COL7A1-207ENST00000467985 PATJQ8NI35 1801 aa20.39■□□□□ 0.85
COL7A1-207ENST00000467985 GVINP1Q7Z2Y8 2422 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 HCRTO43612 131 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 CYP27A1Q02318 531 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 DPYDQ12882 1025 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 FZD5Q13467 585 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 SDHAF4Q5VUM1 108 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 ASCL5Q7RTU5 278 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 GPIHBP1Q8IV16 184 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF687Q8N1G0 1237 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 MAB21L3Q8N8X9 362 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 OR6B3Q8NGW1 331 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 MYLPFQ96A32 169 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 LRRC3BQ96PB8 259 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 MRPL45Q9BRJ2 306 aaKnown RBP20.38■□□□□ 0.85
COL7A1-207ENST00000467985 XYLT2Q9H1B5 865 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 TDP1Q9NUW8 608 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 NDRG2Q9UN36 371 aaKnown RBP20.38■□□□□ 0.85
COL7A1-207ENST00000467985 TRAF3IP3Q9Y228 551 aa20.38■□□□□ 0.85
COL7A1-207ENST00000467985 LRRIQ3A6PVS8 624 aaPredicted RBP20.37■□□□□ 0.85
COL7A1-207ENST00000467985 TRIM66O15016 1216 aa20.37■□□□□ 0.85
COL7A1-207ENST00000467985 ZNF202O95125 648 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms