RNA–Protein interactions for RNA: ENST00000467114.2

PRPF40A-205, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 546 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-205ENST00000467114 ZFXP17010 805 aaPredicted RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 PIK3CGP48736 1102 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 CCT8P50990 548 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 HABP2Q14520 560 aaPredicted RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 SLC30A10Q6XR72 485 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 ZNF782Q6ZMW2 699 aaPredicted RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 WDR75Q8IWA0 830 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 CAMKK1Q8N5S9 505 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 VGLL2Q8N8G2 317 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 PSD4Q8NDX1 1056 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 CNPPD1Q9BV87 410 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 C22orf23Q9BZE7 217 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 DPH1Q9BZG8 443 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 TPSD1Q9BZJ3 242 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 ZMAT3Q9HA38 289 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 GNL3LQ9NVN8 582 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 GEMIN8Q9NWZ8 242 aaKnown RBP5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 GOLGA6AQ9NYA3 693 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 SERGEFQ9UGK8 458 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 AGAP1Q9UPQ3 857 aa5.61□□□□□ -1.51
PRPF40A-205ENST00000467114 TARM1B6A8C7 271 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 FAM227AF5H4B4 570 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 TPP1O14773 563 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 KIF3BO15066 747 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 AHSGP02765 367 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 HNRNPCP07910 306 aaKnown RBP eCLIP5.6□□□□□ -1.514e-6■■■□□ 18.4
PRPF40A-205ENST00000467114 GJB1P08034 283 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 ATF3P18847 181 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 PCSK6P29122 969 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 TOB1P50616 345 aaPredicted RBP5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 GRM1Q13255 1194 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 BMPR2Q13873 1038 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 PLAC9Q5JTB6 97 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 TAF2Q6P1X5 1199 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 MAEAQ7L5Y9 396 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 PPP1R32Q7Z5V6 425 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 SRGAP1Q7Z6B7 1085 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 FAM109AQ8N4B1 249 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 TIFAQ96CG3 184 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 ACTRT3Q9BYD9 372 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 SEMA4CQ9C0C4 833 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 SMOC2Q9H3U7 446 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 PRDM11Q9NQV5 511 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 CFAP97Q9P2B7 532 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 PCDHA1Q9Y5I3 950 aa5.6□□□□□ -1.51
PRPF40A-205ENST00000467114 ZNF785A8K8V0 405 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 MYO1FO00160 1098 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 FRS3O43559 492 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 DNAJB5O75953 348 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 HMGB1P09429 215 aaKnown RBP5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 NPR1P16066 1061 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 RHCEP18577 417 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 HDCP19113 662 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 GNALP38405 381 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 KRTAP10-9P60411 292 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 PSMC1P62191 440 aaKnown RBP5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 GPSM2P81274 684 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 RHDQ02161 417 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 MAPK7Q13164 816 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 FGL2Q14314 439 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 ARHGAP29Q52LW3 1261 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 MTX3Q5HYI7 312 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 ZNF366Q8N895 744 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 IL31RAQ8NI17 732 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 BHMT2Q9H2M3 363 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 MRPS18AQ9NVS2 196 aaKnown RBP5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 DKK3Q9UBP4 350 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 FEZ2Q9UHY8 353 aaPredicted RBP5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 MED16Q9Y2X0 877 aa5.59□□□□□ -1.51
PRPF40A-205ENST00000467114 H3BUI4 141 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 GNAI3P08754 354 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 EBLN1P0CF75 366 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 PRR35P0CG20 571 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 ITGALP20701 1170 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF135P52742 658 aaPredicted RBP5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 GNAI1P63096 354 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 CNN3Q15417 329 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 SLC44A4Q53GD3 710 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 RBM20Q5T481 1227 aaKnown RBP5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 C11orf87Q6NUJ2 197 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 APOA5Q6Q788 366 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF551Q7Z340 670 aaPredicted RBP5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 FAM156AQ8NDB6 213 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 ARMT1Q9H993 441 aa5.58□□□□□ -1.52
PRPF40A-205ENST00000467114 FRMPD2Q68DX3 1309 aaPredicted RBP5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 TP73O15350 636 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 RARBP10826 455 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 JUPP14923 745 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 KELP23276 732 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 SMARCA1P28370 1054 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 CTGFP29279 349 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 SEMA5AQ13591 1074 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 TBCCQ15814 346 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 PROSER3Q2NL68 480 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 TMEM119Q4V9L6 283 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 ZNF626Q68DY1 528 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 CEP85Q6P2H3 762 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 ATRIPQ8WXE1 791 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 FAM136AQ96C01 138 aa5.57□□□□□ -1.52
PRPF40A-205ENST00000467114 REPS1Q96D71 796 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms