RNA–Protein interactions for RNA: ENST00000466359.1

NFX1-205, Transcript of nuclear transcription factor, X-box binding 1, humanhuman

TSL 3

Gene NFX1, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFX1-205ENST00000466359 POLIQ9UNA4 740 aa6.29□□□□□ -1.4
NFX1-205ENST00000466359 USTQ9Y2C2 406 aa6.29□□□□□ -1.4
NFX1-205ENST00000466359 NME7Q9Y5B8 376 aa6.29□□□□□ -1.4
NFX1-205ENST00000466359 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.29□□□□□ -1.4
NFX1-205ENST00000466359 BZW2Q9Y6E2 419 aaKnown RBP6.29□□□□□ -1.4
NFX1-205ENST00000466359 ZFP37Q9Y6Q3 630 aaPredicted RBP6.29□□□□□ -1.4
NFX1-205ENST00000466359 EYSQ5T1H1 3165 aa6.29□□□□□ -1.4
NFX1-205ENST00000466359 ATP8B3O60423 1300 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 CLUHO75153 1309 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 REV3LO60673 3130 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 PRRC2BQ5JSZ5 2229 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 O00370 1275 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 C2CD2LO14523 706 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ZNF197O14709 1029 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 TNFRSF10BO14763 440 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 PER2O15055 1255 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 TEX33O43247 280 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 MED7O43513 233 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 GFPT2O94808 682 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 LSM8O95777 96 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SETSIPP0DME0 302 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 CSH1P0DML2 217 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 CSH2P0DML3 217 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 RPL17P18621 184 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 CDH5P33151 784 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 CLCN1P35523 988 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 PRKCIP41743 596 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 STAT1P42224 750 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ALDH1A3P47895 512 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 EPHB3P54753 998 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SLC8A3P57103 927 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SNX16P57768 344 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 CDK17Q00537 523 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 PTK2Q05397 1052 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ADCY1Q08828 1119 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 DUSP4Q13115 394 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 DRAP1Q14919 205 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 PABPC1LQ4VXU2 614 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 SLC39A12Q504Y0 691 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SGO2Q562F6 1265 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 HSP90AA4PQ58FG1 418 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 RAB41Q5JT25 222 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ATAT1Q5SQI0 421 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 IQCEQ6IPM2 695 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 PPP1R2P3Q6NXS1 205 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 TMEM270Q6UE05 265 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 RRAGAQ7L523 313 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 TMEM110Q86TL2 294 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SPATA2LQ8IUW3 424 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 VSTM4Q8IW00 320 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ARHGEF19Q8IW93 802 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ATAD1Q8NBU5 361 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ZNF397Q8NF99 534 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 NEK11Q8NG66 645 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SLC35F5Q8WV83 523 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ATXN2LQ8WWM7 1075 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 ZNF606Q8WXB4 792 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 AUTS2Q8WXX7 1259 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 DDX1Q92499 740 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 BAP1Q92560 729 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ZNF707Q96C28 371 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 CYFIP2Q96F07 1278 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 SMARCD1Q96GM5 515 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 HEXIM2Q96MH2 286 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 TWNKQ96RR1 684 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 ARID3AQ99856 593 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 LRRC3Q9BY71 257 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 B3GNT5Q9BYG0 378 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 RBSNQ9H1K0 784 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 FBXO44Q9H4M3 255 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 UBE2ZQ9H832 354 aaPredicted RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 MMRN2Q9H8L6 949 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 WDR6Q9NNW5 1121 aaKnown RBP6.28□□□□□ -1.4
NFX1-205ENST00000466359 TMLHEQ9NVH6 421 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.28□□□□□ -1.4
NFX1-205ENST00000466359 GDE1Q9NZC3 331 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.28□□□□□ -1.4
NFX1-205ENST00000466359 FAM50BQ9Y247 325 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 INSL5Q9Y5Q6 135 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 USP3Q9Y6I4 520 aa6.28□□□□□ -1.4
NFX1-205ENST00000466359 CCDC195A0A1B0GUA6 201 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 RNF225M0QZC1 329 aaPredicted RBP6.27□□□□□ -1.41
NFX1-205ENST00000466359 PRRG1O14668 218 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 XPO1O14980 1071 aaKnown RBP6.27□□□□□ -1.41
NFX1-205ENST00000466359 RTN3O95197 1032 aaPredicted RBP6.27□□□□□ -1.41
NFX1-205ENST00000466359 SEC24AO95486 1093 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 C8AP07357 584 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 ZDHHC11BP0C7U3 371 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 FAM200BP0CF97 657 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 CPB1P15086 417 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 CYP11B1P15538 503 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 EPCAMP16422 314 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 HMGA1P17096 107 aaKnown RBP6.27□□□□□ -1.41
NFX1-205ENST00000466359 NPR3P17342 541 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 PTPN2P17706 415 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 DDX6P26196 483 aaKnown RBP eCLIP6.27□□□□□ -1.41
NFX1-205ENST00000466359 CDC25BP30305 580 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 SOX5P35711 763 aa6.27□□□□□ -1.41
NFX1-205ENST00000466359 SCNN1AP37088 669 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms